Genome Details
Selected Rep_genome_ID: HRGMv2_2678
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2678 | 3,093,353 | 98.16% | 0.68% | Cameroon | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2678_CGC8 | CGCFAM_00040 | Yes | 7 | 4 | |
| HRGMv2_2678_CGC6 | CGCFAM_00054 | Yes | 4 | 3 | |
| HRGMv2_2678_CGC31 | CGCFAM_00258 | Yes | 8 | 1 | |
| HRGMv2_2678_CGC22 | CGCFAM_00264 | Yes | 4 | 1 | |
| HRGMv2_2678_CGC5 | CGCFAM_00507 | Yes | 4 | 2 | |
| HRGMv2_2678_CGC14 | CGCFAM_00688 | Yes | 8 | 2 | |
| HRGMv2_2678_CGC23 | CGCFAM_00885 | Yes | 3 | 1 | |
| HRGMv2_2678_CGC4 | CGCFAM_00931 | Yes | 6 | 1 | alpha-glucan |
| HRGMv2_2678_CGC16 | CGCFAM_01009 | Yes | 12 | 1 | |
| HRGMv2_2678_CGC3 | CGCFAM_02903 | Yes | 7 | 2 | |
| HRGMv2_2678_CGC24 | CGCFAM_06157 | Yes | 6 | 1 | |
| HRGMv2_2678_CGC30 | CGCFAM_06471 | Yes | 9 | 1 | |
| HRGMv2_2678_CGC35 | CGCFAM_10147 | Yes | 4 | 1 |
Top CAZyme Families