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Cluster: HRGMv2_2678_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2678_87 HRGMv2_2678_87_1 3 701 - 3.A.1.15.2
TC HRGMv2_2678_87 HRGMv2_2678_87_2 698 1408 - 3.A.1.14.6
TC HRGMv2_2678_87 HRGMv2_2678_87_3 1422 2432 - 3.A.1.15.3
NULL(UNKNOWN) HRGMv2_2678_87 HRGMv2_2678_87_4 2483 2788 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2678_87 HRGMv2_2678_87_5 2955 3104 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2678_87 HRGMv2_2678_87_6 3118 4593 - GH32
STP HRGMv2_2678_87 HRGMv2_2678_87_7 4618 6285 - SBP_bac_1
TC HRGMv2_2678_87 HRGMv2_2678_87_8 6352 7257 - 3.A.1.1.10
TC HRGMv2_2678_87 HRGMv2_2678_87_9 7271 8218 - 3.A.1.1.10
Gene ID: HRGMv2_2678_87_1
Type: TC
Location: 3 - 701 (-)
Gene ID: HRGMv2_2678_87_2
Type: TC
Location: 698 - 1408 (-)
Gene ID: HRGMv2_2678_87_3
Type: TC
Location: 1422 - 2432 (-)
Gene ID: HRGMv2_2678_87_4
Type:
Location: 2483 - 2788 (-)
Gene ID: HRGMv2_2678_87_5
Type:
Location: 2955 - 3104 (+)
Gene ID: HRGMv2_2678_87_6
Type: CAZyme
Location: 3118 - 4593 (-)
Gene ID: HRGMv2_2678_87_7
Type: STP
Location: 4618 - 6285 (-)
Gene ID: HRGMv2_2678_87_8
Type: TC
Location: 6352 - 7257 (-)
Gene ID: HRGMv2_2678_87_9
Type: TC
Location: 7271 - 8218 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Faecalibacterium
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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