Cluster: HRGMv2_2678_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2678
- CGC Family ID: CGCFAM_00885
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2678_50 | HRGMv2_2678_50_20 | 15005 | 16384 | + | 2.A.66.1.33 |
| CAZyme | HRGMv2_2678_50 | HRGMv2_2678_50_21 | 16825 | 17874 | - | GH170 |
| TC | HRGMv2_2678_50 | HRGMv2_2678_50_22 | 17867 | 19309 | - | 4.A.1.2.7 |
Gene ID: HRGMv2_2678_50_20
Type: TC
Location: 15005 - 16384 (+)
Type: TC
Location: 15005 - 16384 (+)
Gene ID: HRGMv2_2678_50_21
Type: CAZyme
Location: 16825 - 17874 (-)
Type: CAZyme
Location: 16825 - 17874 (-)
Gene ID: HRGMv2_2678_50_22
Type: TC
Location: 17867 - 19309 (-)
Type: TC
Location: 17867 - 19309 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.