Cluster: HRGMv2_2678_CGC35
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2678
- CGC Family ID: CGCFAM_10147
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2678_127 | HRGMv2_2678_127_2 | 160 | 810 | + | 9.B.28.1.2 |
| NULL(UNKNOWN) | HRGMv2_2678_127 | HRGMv2_2678_127_3 | 797 | 1414 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2678_127 | HRGMv2_2678_127_4 | 1459 | 2391 | + | PfkB |
| CAZyme | HRGMv2_2678_127 | HRGMv2_2678_127_5 | 2395 | 4224 | + | GH13_4 |
Gene ID: HRGMv2_2678_127_2
Type: TC
Location: 160 - 810 (+)
Type: TC
Location: 160 - 810 (+)
Gene ID: HRGMv2_2678_127_3
Type:
Location: 797 - 1414 (+)
Type:
Location: 797 - 1414 (+)
Gene ID: HRGMv2_2678_127_4
Type: STP
Location: 1459 - 2391 (+)
Type: STP
Location: 1459 - 2391 (+)
Gene ID: HRGMv2_2678_127_5
Type: CAZyme
Location: 2395 - 4224 (+)
Type: CAZyme
Location: 2395 - 4224 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.