Genome Details
Selected Rep_genome_ID: HRGMv2_2310
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900541255
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2310 | 3,250,917 | 98.08% | 0% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2310_CGC5 | CGCFAM_00008 | Yes | 4 | 1 | |
| HRGMv2_2310_CGC9 | CGCFAM_00011 | Yes | 9 | 2 | |
| HRGMv2_2310_CGC15 | CGCFAM_00033 | Yes | 6 | 3 | |
| HRGMv2_2310_CGC7 | CGCFAM_00039 | Yes | 7 | 3 | |
| HRGMv2_2310_CGC8 | CGCFAM_00086 | Yes | 3 | 2 | |
| HRGMv2_2310_CGC13 | CGCFAM_00157 | Yes | 4 | 1 | |
| HRGMv2_2310_CGC4 | CGCFAM_00210 | Yes | 7 | 1 | |
| HRGMv2_2310_CGC17 | CGCFAM_00342 | Yes | 7 | 2 | |
| HRGMv2_2310_CGC1 | CGCFAM_01320 | Yes | 8 | 2 | |
| HRGMv2_2310_CGC11 | CGCFAM_01992 | Yes | 9 | 2 | |
| HRGMv2_2310_CGC22 | CGCFAM_02282 | Yes | 6 | 1 | |
| HRGMv2_2310_CGC3 | CGCFAM_04274 | Yes | 3 | 1 | |
| HRGMv2_2310_CGC23 | CGCFAM_09144 | Yes | 4 | 1 |
Top CAZyme Families