Cluster: HRGMv2_2310_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2310
- CGC Family ID: CGCFAM_00157
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2310_30 | HRGMv2_2310_30_22 | 19879 | 20913 | + | 2.A.56.1.5 |
| TC | HRGMv2_2310_30 | HRGMv2_2310_30_23 | 20933 | 21424 | + | 2.A.56.1.6 |
| TC | HRGMv2_2310_30 | HRGMv2_2310_30_24 | 21428 | 22729 | + | 2.A.56.1.5 |
| CAZyme | HRGMv2_2310_30 | HRGMv2_2310_30_25 | 22859 | 25519 | - | GT51 |
Gene ID: HRGMv2_2310_30_22
Type: TC
Location: 19879 - 20913 (+)
Type: TC
Location: 19879 - 20913 (+)
Gene ID: HRGMv2_2310_30_23
Type: TC
Location: 20933 - 21424 (+)
Type: TC
Location: 20933 - 21424 (+)
Gene ID: HRGMv2_2310_30_24
Type: TC
Location: 21428 - 22729 (+)
Type: TC
Location: 21428 - 22729 (+)
Gene ID: HRGMv2_2310_30_25
Type: CAZyme
Location: 22859 - 25519 (-)
Type: CAZyme
Location: 22859 - 25519 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900541255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.