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Cluster: HRGMv2_2310_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2310_23 HRGMv2_2310_23_14 15330 17564 + GT2
CAZyme HRGMv2_2310_23 HRGMv2_2310_23_15 17539 18717 + GH5_2
peptidase HRGMv2_2310_23 HRGMv2_2310_23_16 18827 20317 - M17.UPW
TC HRGMv2_2310_23 HRGMv2_2310_23_17 20314 21261 - 3.A.1.5.25
TC HRGMv2_2310_23 HRGMv2_2310_23_18 21254 22336 - 3.A.1.5.25
TC HRGMv2_2310_23 HRGMv2_2310_23_19 22350 23330 - 3.A.1.5.31
TC HRGMv2_2310_23 HRGMv2_2310_23_20 23330 24274 - 3.A.1.5.10
TC HRGMv2_2310_23 HRGMv2_2310_23_21 24275 26131 - 3.A.1.5.18
TC HRGMv2_2310_23 HRGMv2_2310_23_22 26156 28045 - 3.A.1.5.18
Gene ID: HRGMv2_2310_23_14
Type: CAZyme
Location: 15330 - 17564 (+)
Gene ID: HRGMv2_2310_23_15
Type: CAZyme
Location: 17539 - 18717 (+)
Gene ID: HRGMv2_2310_23_16
Type: peptidase
Location: 18827 - 20317 (-)
Gene ID: HRGMv2_2310_23_17
Type: TC
Location: 20314 - 21261 (-)
Gene ID: HRGMv2_2310_23_18
Type: TC
Location: 21254 - 22336 (-)
Gene ID: HRGMv2_2310_23_19
Type: TC
Location: 22350 - 23330 (-)
Gene ID: HRGMv2_2310_23_20
Type: TC
Location: 23330 - 24274 (-)
Gene ID: HRGMv2_2310_23_21
Type: TC
Location: 24275 - 26131 (-)
Gene ID: HRGMv2_2310_23_22
Type: TC
Location: 26156 - 28045 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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