dbCAN Logo

Cluster: HRGMv2_2310_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2310_1 HRGMv2_2310_1_26 31798 32877 - 3.A.1.1.46
TF HRGMv2_2310_1 HRGMv2_2310_1_27 33057 33845 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_2310_1 HRGMv2_2310_1_28 33858 34982 - GH105
CAZyme HRGMv2_2310_1 HRGMv2_2310_1_29 34985 36550 - GH28
NULL(UNKNOWN) HRGMv2_2310_1 HRGMv2_2310_1_30 36555 37193 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2310_1 HRGMv2_2310_1_31 37215 37787 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2310_1 HRGMv2_2310_1_32 37790 38728 - 3.A.1.1.22
TC HRGMv2_2310_1 HRGMv2_2310_1_33 38689 38871 - 3.A.1.1.46
Gene ID: HRGMv2_2310_1_26
Type: TC
Location: 31798 - 32877 (-)
Gene ID: HRGMv2_2310_1_27
Type: TF
Location: 33057 - 33845 (+)
Gene ID: HRGMv2_2310_1_28
Type: CAZyme
Location: 33858 - 34982 (-)
Gene ID: HRGMv2_2310_1_29
Type: CAZyme
Location: 34985 - 36550 (-)
Gene ID: HRGMv2_2310_1_30
Type:
Location: 36555 - 37193 (-)
Gene ID: HRGMv2_2310_1_31
Type:
Location: 37215 - 37787 (-)
Gene ID: HRGMv2_2310_1_32
Type: TC
Location: 37790 - 38728 (-)
Gene ID: HRGMv2_2310_1_33
Type: TC
Location: 38689 - 38871 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List