Cluster: HRGMv2_2310_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2310
- CGC Family ID: CGCFAM_00008
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2310_9 | HRGMv2_2310_9_29 | 26095 | 29214 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_2310_9 | HRGMv2_2310_9_30 | 29211 | 30143 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2310_9 | HRGMv2_2310_9_31 | 30140 | 31516 | - | 3.A.1.103.6 |
| TC | HRGMv2_2310_9 | HRGMv2_2310_9_32 | 31525 | 32343 | - | 3.A.1.104.2 |
Gene ID: HRGMv2_2310_9_29
Type: CAZyme
Location: 26095 - 29214 (-)
Type: CAZyme
Location: 26095 - 29214 (-)
Gene ID: HRGMv2_2310_9_30
Type:
Location: 29211 - 30143 (-)
Type:
Location: 29211 - 30143 (-)
Gene ID: HRGMv2_2310_9_31
Type: TC
Location: 30140 - 31516 (-)
Type: TC
Location: 30140 - 31516 (-)
Gene ID: HRGMv2_2310_9_32
Type: TC
Location: 31525 - 32343 (-)
Type: TC
Location: 31525 - 32343 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900541255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.