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Cluster: HRGMv2_2310_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2310_16 HRGMv2_2310_16_6 5881 6651 + 3.A.1.103.4
TC HRGMv2_2310_16 HRGMv2_2310_16_7 6651 7955 + 3.A.1.103.4
pfam HRGMv2_2310_16 HRGMv2_2310_16_8 7961 9526 + Methyltransf_21
CAZyme HRGMv2_2310_16 HRGMv2_2310_16_9 9544 12048 + GT4
NULL(UNKNOWN) HRGMv2_2310_16 HRGMv2_2310_16_10 12149 14191 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2310_16 HRGMv2_2310_16_11 14227 15201 + GT2
STP HRGMv2_2310_16 HRGMv2_2310_16_12 15191 15829 + Nitroreductase
NULL(UNKNOWN) HRGMv2_2310_16 HRGMv2_2310_16_13 15844 17469 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2310_16 HRGMv2_2310_16_14 17466 18398 + 9.B.102.7.10
Gene ID: HRGMv2_2310_16_6
Type: TC
Location: 5881 - 6651 (+)
Gene ID: HRGMv2_2310_16_7
Type: TC
Location: 6651 - 7955 (+)
Gene ID: HRGMv2_2310_16_8
Type: pfam
Location: 7961 - 9526 (+)
Gene ID: HRGMv2_2310_16_9
Type: CAZyme
Location: 9544 - 12048 (+)
Gene ID: HRGMv2_2310_16_10
Type:
Location: 12149 - 14191 (+)
Gene ID: HRGMv2_2310_16_11
Type: CAZyme
Location: 14227 - 15201 (+)
Gene ID: HRGMv2_2310_16_12
Type: STP
Location: 15191 - 15829 (+)
Gene ID: HRGMv2_2310_16_13
Type:
Location: 15844 - 17469 (+)
Gene ID: HRGMv2_2310_16_14
Type: TC
Location: 17466 - 18398 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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