PROTEIN: HRGMv2_2310_16_10
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Protein File & Metadata
Source:
HRGMv2_2310_16_10.pdb
Genome ID:
Protein ID:
HRGMv2_2310_16_10
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Protein Sequence
MSACVLGLYL WHVRSFSAFY VLDDEFGYWS NGALLAGYDW SGTLRGVANY SYGYGFLLAP 60 IIKVFDTPEL AYQAAIVLNS ILGIVTFGII LLCFQELYSQ VKYYKRLFIA AAVCLNSNYI 120 VNTHIAWSET LLNLLIWVLI YLLIKFFQQK KMSYLILASI CCVFSLMVHT RMISIVLSFL 180 FIVIVALKEK KIDVKKQGLF FLIFVGELLI WYLLKSYFKE TLWGNNAGDV NDFAGELQKI 240 AGLFTSKGII NFGMIILGQL LYCGVSTLLL SYFCLFYVIC RIYDVLKRKL QKLSTTEYLF 300 AFLLVCLSIT VCMGSLALIN ANRIDHYIYG RYIELIIIPI IGLSSLEIFC VSPIKYKSNL 360 GSCSVIAFIC SGYLIGYKIL KEGASKYSIA CSNAIFSFID EDSLNIDKML FTVIALFLLL 420 AVIRYFFKRR YIYIVAGVIA FYGGFNALRS IDAAIVPVHK NYSRIYSLVG DVQDELNDKT 480 IYFLLDNKDY WGKSTSKAIF QMAMKDKKII AKTVEELEQE TGNYYLLGSN ASPFLERPGG 540 LTIKHSLGNY FVWEKGSGVN NHIDISLNSF SSQNRNTEIE DKFISNGEKG FLLYGPYYIL 600 EPSNYKVKLN VKVINGEQEN SKGYFEVVSG STILGRKDII NSGMIMLDFC LEESLPNIEL 660 RLYIDEGAIF EVTNVEMYKG 680
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F8A5-F1-model_v4 | 1 | 559 | 30 | 668 | 0.6111 |
0.7407 |
| AF-Q9HUZ2-F1-model_v4 | 1 | 679 | 12 | 478 | 0.6009 |
0.7313 |
| AF-K0EVV4-F1-model_v4 | 1 | 560 | 36 | 662 | 0.5935 |
0.7162 |
| AF-K0F428-F1-model_v4 | 1 | 560 | 36 | 665 | 0.5913 |
0.7144 |
| AF-Q9HY61-F1-model_v4 | 1 | 679 | 10 | 549 | 0.5907 |
0.6761 |
| AF-Q8ZP99-F1-model_v4 | 1 | 649 | 26 | 516 | 0.5869 |
0.7082 |
| AF-K0F7B2-F1-model_v4 | 1 | 557 | 17 | 481 | 0.5867 |
0.7286 |
| AF-P76473-F1-model_v4 | 1 | 678 | 9 | 550 | 0.5848 |
0.6679 |
| AF-K0EN63-F1-model_v4 | 1 | 580 | 6 | 519 | 0.5819 |
0.6921 |
| AF-B1WBY3-F1-model_v4 | 1 | 677 | 13 | 488 | 0.5802 |
0.7012 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A448LHH2 | GT89 | 1 | 680 | 11 | 587 | 0.644 |
0.7178 |
| AF-A0A448LHH2-F1-model_v4 | GT89 | 1 | 680 | 11 | 587 | 0.644 |
0.7178 |
| AF-A0A3G6S7E8-F1-model_v4 | GT89 | 1 | 680 | 11 | 587 | 0.6428 |
0.7161 |
| AF-A0A3G6TJL9-F1-model_v4 | GT89 | 1 | 680 | 11 | 587 | 0.6417 |
0.715 |
| AF-F2I0U0-F1-model_v4 | GT0 | 1 | 569 | 9 | 439 | 0.6365 |
0.7953 |
| AF-Q7NFE4-F1-model_v4 | GT83 | 1 | 659 | 21 | 567 | 0.6284 |
0.7226 |
| AF-A0A1W1I1K4-F1-model_v4 | GT83 | 1 | 580 | 10 | 570 | 0.6281 |
0.7131 |
| A0A4V0I1M5 | GT83 | 1 | 674 | 10 | 564 | 0.6261 |
0.711 |
| AF-A0A1Y0HA72-F1-model_v4 | GT83 | 1 | 557 | 21 | 488 | 0.6257 |
0.7669 |
| UCV14583.1 | GT83 | 1 | 558 | 21 | 487 | 0.6243 |
0.7674 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A448LHH2 | GT89 | 1 | 680 | 11 | 587 | 0.644 |
0.7178 |
| A0A4P6HEB7 | GT83 | 1 | 560 | 36 | 493 | 0.6419 |
0.8146 |
| A0A0S3QT15 | GT83 | 1 | 679 | 8 | 453 | 0.6311 |
0.7779 |
| A0A068NUM4 | GT83 | 1 | 555 | 1 | 475 | 0.6295 |
0.7517 |
| A0A097EMF3 | GT83 | 1 | 674 | 8 | 574 | 0.6272 |
0.7024 |
| A0A4V0I1M5 | GT83 | 1 | 674 | 10 | 564 | 0.6261 |
0.711 |
| A0A1Y0HA72 | GT83 | 1 | 557 | 21 | 488 | 0.6257 |
0.7669 |
| D5MJ06 | GT83 | 1 | 560 | 14 | 536 | 0.6255 |
0.7279 |
| UCV16279.1 | GT83 | 1 | 559 | 25 | 514 | 0.6248 |
0.7552 |
| UCV14583.1 | GT83 | 1 | 558 | 21 | 487 | 0.6243 |
0.7674 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ezm-assembly1.cif.gz_A | 1 | 675 | 10 | 537 | 0.5906 |
0.6816 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67270-F1-model_v4 | 1 | 677 | 7 | 498 | 0.6101 |
0.7229 |
| AF-Q1MLH5-F1-model_v4 | 1 | 557 | 8 | 469 | 0.6065 |
0.7408 |
| AF-Q1MJ96-F1-model_v4 | 1 | 559 | 5 | 499 | 0.6025 |
0.7108 |
| AF-Q1MJ94-F1-model_v4 | 1 | 558 | 12 | 496 | 0.5972 |
0.716 |
| AF-A0KGY4-F1-model_v4 | 1 | 560 | 7 | 547 | 0.5944 |
0.6785 |
| AF-A4SQX1-F1-model_v4 | 1 | 560 | 7 | 547 | 0.5935 |
0.6772 |
| AF-P37483-F1-model_v4 | 1 | 601 | 12 | 683 | 0.592 |
0.6809 |
| AF-Q9HY61-F1-model_v4 | 1 | 679 | 10 | 549 | 0.5907 |
0.6761 |
| AF-B7VBN0-F1-model_v4 | 1 | 679 | 10 | 549 | 0.5903 |
0.6755 |
| AF-A6V1N8-F1-model_v4 | 1 | 679 | 10 | 549 | 0.5899 |
0.6746 |