PROTEIN: HRGMv2_2310_16_13
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Protein File & Metadata
Source:
HRGMv2_2310_16_13.pdb
Genome ID:
Protein ID:
HRGMv2_2310_16_13
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Protein Sequence
MQKYMDFINK TVPKVLTQVD RDRHSPTYGC CDRNFWHLKI RDFSSAILQQ TGLSIALLTT 60 VPYPGNVFYG REDVKDWARA SVYYWEKIQL KDGSFNEYYP FEHGFPPTAF SLYSSCETYK 120 RLNMDEPKLT EAFSRTGKYL ASHRETEAYN QEMASITALY SLYTITKENW VLSAVNRKLL 180 LLLEVQSEDG FFPEYGGADI GYLSVFFDMM AEYYWMSRDE RVLKPLEKIL SFLLFFIHPD 240 RTAGGEYGSR NTTYFLPNGL EVMRQLGYPE AEAARDWLFE DADKTGFFMD SVDDRYCSHY 300 LLHSFLRALE KEIQGGATCT EKVVLPFHAG KSTYFSDAGF WSHSEWIERG IPVYMIVGAR 360 KGGVLKLYGK GEQVFADFGY RVNYGKGKIA VTNWQDPSYI VKQKGNSLTV SGHFNLVTLK 420 VGSPFLHLGL RAVAFVAGNK IIRFLKKKII LVDKHTDIAF RRKITFQDGV LQIEDEIESP 480 KPVCLEGADS PSVRHVASGK FFSISDLCFH DCKSYGNSKK FYIKKKYDCQ SGRFIENEEL 540 K 541
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175W4C8-F1-model_v4 | 1 | 540 | 28 | 667 | 0.6253 |
0.7062 |
| AF-U7PL06-F1-model_v4 | 1 | 540 | 26 | 673 | 0.6237 |
0.707 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7G8UMI7-F1-model_v4 | PL37 | 1 | 531 | 3 | 597 | 0.7025 |
0.7645 |
| A0A975CX51 | PL37 | 1 | 533 | 6 | 588 | 0.6931 |
0.7486 |
| AF-A0A1H1KZV5-F1-model_v4 | PL37 | 1 | 534 | 30 | 629 | 0.6905 |
0.7651 |
| AF-A0A172TXM4-F1-model_v4 | PL37 | 1 | 533 | 28 | 625 | 0.689 |
0.7611 |
| AF-C6Y378-F1-model_v4 | PL37 | 1 | 533 | 29 | 628 | 0.6886 |
0.762 |
| AF-A0A3B7MLQ9-F1-model_v4 | PL37 | 1 | 535 | 24 | 624 | 0.6879 |
0.757 |
| AF-A0A7G8UQS2-F1-model_v4 | PL37 | 4 | 532 | 1 | 610 | 0.6868 |
0.7569 |
| AF-A0A249SYE9-F1-model_v4 | PL37 | 1 | 531 | 39 | 624 | 0.679 |
0.7526 |
| AF-G8T879-F1-model_v4 | PL37 | 1 | 532 | 44 | 640 | 0.6784 |
0.7586 |
| AF-A0A0C5WH80-F1-model_v4 | PL37 | 1 | 531 | 41 | 641 | 0.6735 |
0.7558 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7G8UMI7 | PL37 | 1 | 531 | 3 | 597 | 0.7025 |
0.7645 |
| C6XTA3 | PL37 | 1 | 533 | 29 | 634 | 0.6954 |
0.7727 |
| A0A975CX51 | PL37 | 1 | 533 | 6 | 588 | 0.6931 |
0.7486 |
| C6Y378 | PL37 | 1 | 533 | 29 | 628 | 0.6886 |
0.762 |
| A0A7G8UQS2 | PL37 | 4 | 532 | 1 | 610 | 0.6868 |
0.7569 |
| A0A6P1THD6 | PL37 | 2 | 532 | 1 | 596 | 0.6843 |
0.7455 |
| A0A3B7MN57 | PL37 | 1 | 532 | 43 | 639 | 0.6778 |
0.758 |
| BCM88302.1 | PL37 | 1 | 533 | 9 | 593 | 0.6774 |
0.7358 |
| A0A413LPX4 | PL37 | 1 | 532 | 3 | 644 | 0.6701 |
0.752 |
| A0A7X9TCJ0 | PL37 | 1 | 531 | 42 | 642 | 0.6666 |
0.7491 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2wda-assembly1.cif.gz_A | 1 | 540 | 20 | 637 | 0.6109 |
0.717 |
| 1x1j-assembly1.cif.gz_A | 1 | 540 | 25 | 643 | 0.6072 |
0.7164 |
| 2e24-assembly1.cif.gz_A | 1 | 540 | 25 | 643 | 0.6048 |
0.7135 |
| 1j0n-assembly1.cif.gz_A | 1 | 540 | 25 | 643 | 0.6048 |
0.7135 |
| 2e22-assembly1.cif.gz_A | 1 | 540 | 25 | 643 | 0.6042 |
0.7129 |
| 6hzn-assembly1.cif.gz_A | 1 | 541 | 42 | 655 | 0.6029 |
0.7069 |
| 4fnv-assembly1.cif.gz_A | 7 | 541 | 57 | 636 | 0.5995 |
0.676 |
| 6jpn-assembly1.cif.gz_A | 1 | 541 | 43 | 631 | 0.5669 |
0.6755 |
| 6jph-assembly1.cif.gz_A | 1 | 540 | 43 | 626 | 0.5664 |
0.6761 |
| 6ljl-assembly1.cif.gz_A | 1 | 541 | 159 | 793 | 0.5464 |
0.6723 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-T2KMH5-F1-model_v4 | 1 | 531 | 39 | 638 | 0.6719 |
0.7527 |
| AF-Q89YR9-F1-model_v4 | 7 | 541 | 100 | 679 | 0.5848 |
0.6763 |
| AF-Q9AQS0-F1-model_v4 | 1 | 540 | 50 | 668 | 0.5627 |
0.7173 |
| AF-Q0VBN2-F1-model_v4 | 1 | 540 | 79 | 690 | 0.5147 |
0.7136 |
| AF-Q8IZU8-F1-model_v4 | 1 | 541 | 84 | 697 | 0.5108 |
0.7082 |