Cluster: HRGMv2_2310_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2310
- CGC Family ID: CGCFAM_00086
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2310_15 | HRGMv2_2310_15_38 | 38321 | 40132 | + | 3.A.16.1.1 |
| CAZyme | HRGMv2_2310_15 | HRGMv2_2310_15_39 | 40557 | 41477 | + | CBM34 |
| CAZyme | HRGMv2_2310_15 | HRGMv2_2310_15_40 | 41478 | 42596 | + | GH13_39 |
Gene ID: HRGMv2_2310_15_38
Type: TC
Location: 38321 - 40132 (+)
Type: TC
Location: 38321 - 40132 (+)
Gene ID: HRGMv2_2310_15_39
Type: CAZyme
Location: 40557 - 41477 (+)
Type: CAZyme
Location: 40557 - 41477 (+)
Gene ID: HRGMv2_2310_15_40
Type: CAZyme
Location: 41478 - 42596 (+)
Type: CAZyme
Location: 41478 - 42596 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900541255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.