Cluster: HRGMv2_2310_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2310
- CGC Family ID: CGCFAM_09144
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2310_107 | HRGMv2_2310_107_1 | 89 | 1705 | + | 8.A.7.1.1 |
| pfam | HRGMv2_2310_107 | HRGMv2_2310_107_2 | 1730 | 2560 | + | Hydrolase | S6PP | Hydrolase_3 |
| TC | HRGMv2_2310_107 | HRGMv2_2310_107_3 | 2591 | 4561 | + | 4.A.1.2.12 |
| CAZyme | HRGMv2_2310_107 | HRGMv2_2310_107_4 | 4640 | 6487 | + | GH13_4 |
Gene ID: HRGMv2_2310_107_1
Type: TC
Location: 89 - 1705 (+)
Type: TC
Location: 89 - 1705 (+)
Gene ID: HRGMv2_2310_107_2
Type: pfam
Location: 1730 - 2560 (+)
Type: pfam
Location: 1730 - 2560 (+)
Gene ID: HRGMv2_2310_107_3
Type: TC
Location: 2591 - 4561 (+)
Type: TC
Location: 2591 - 4561 (+)
Gene ID: HRGMv2_2310_107_4
Type: CAZyme
Location: 4640 - 6487 (+)
Type: CAZyme
Location: 4640 - 6487 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900541255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.