Cluster: HRGMv2_2310_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2310
- CGC Family ID: CGCFAM_00210
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2310_6 | HRGMv2_2310_6_71 | 65362 | 66066 | - | 9.B.27.1.2 |
| pfam | HRGMv2_2310_6 | HRGMv2_2310_6_72 | 66102 | 67115 | - | APH |
| CAZyme | HRGMv2_2310_6 | HRGMv2_2310_6_73 | 67123 | 68454 | - | GT2 |
| pfam | HRGMv2_2310_6 | HRGMv2_2310_6_74 | 68455 | 68889 | - | C_GCAxxG_C_C |
| pfam | HRGMv2_2310_6 | HRGMv2_2310_6_75 | 68910 | 69893 | - | CCG | CCG |
| TC | HRGMv2_2310_6 | HRGMv2_2310_6_76 | 69922 | 70605 | - | 9.B.27.1.1 |
| TC | HRGMv2_2310_6 | HRGMv2_2310_6_77 | 70790 | 72118 | - | 2.A.66.1.37 |
Gene ID: HRGMv2_2310_6_71
Type: TC
Location: 65362 - 66066 (-)
Type: TC
Location: 65362 - 66066 (-)
Gene ID: HRGMv2_2310_6_72
Type: pfam
Location: 66102 - 67115 (-)
Type: pfam
Location: 66102 - 67115 (-)
Gene ID: HRGMv2_2310_6_73
Type: CAZyme
Location: 67123 - 68454 (-)
Type: CAZyme
Location: 67123 - 68454 (-)
Gene ID: HRGMv2_2310_6_74
Type: pfam
Location: 68455 - 68889 (-)
Type: pfam
Location: 68455 - 68889 (-)
Gene ID: HRGMv2_2310_6_75
Type: pfam
Location: 68910 - 69893 (-)
Type: pfam
Location: 68910 - 69893 (-)
Gene ID: HRGMv2_2310_6_76
Type: TC
Location: 69922 - 70605 (-)
Type: TC
Location: 69922 - 70605 (-)
Gene ID: HRGMv2_2310_6_77
Type: TC
Location: 70790 - 72118 (-)
Type: TC
Location: 70790 - 72118 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900541255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.