Cluster: HRGMv2_2310_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2310
- CGC Family ID: CGCFAM_00342
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2310_56 | HRGMv2_2310_56_12 | 13625 | 14737 | - | 3.A.1.1.22 |
| CAZyme | HRGMv2_2310_56 | HRGMv2_2310_56_13 | 14784 | 16625 | - | GH13_4 |
| pfam | HRGMv2_2310_56 | HRGMv2_2310_56_14 | 16631 | 17095 | - | DUF6106 |
| CAZyme | HRGMv2_2310_56 | HRGMv2_2310_56_15 | 17112 | 19307 | - | GH36 |
| TC | HRGMv2_2310_56 | HRGMv2_2310_56_16 | 19338 | 20174 | - | 3.A.1.1.34 |
| TC | HRGMv2_2310_56 | HRGMv2_2310_56_17 | 20184 | 21080 | - | 3.A.1.1.7 |
| TC | HRGMv2_2310_56 | HRGMv2_2310_56_18 | 21093 | 22124 | - | 3.A.1.1.44 |
Gene ID: HRGMv2_2310_56_12
Type: TC
Location: 13625 - 14737 (-)
Type: TC
Location: 13625 - 14737 (-)
Gene ID: HRGMv2_2310_56_13
Type: CAZyme
Location: 14784 - 16625 (-)
Type: CAZyme
Location: 14784 - 16625 (-)
Gene ID: HRGMv2_2310_56_14
Type: pfam
Location: 16631 - 17095 (-)
Type: pfam
Location: 16631 - 17095 (-)
Gene ID: HRGMv2_2310_56_15
Type: CAZyme
Location: 17112 - 19307 (-)
Type: CAZyme
Location: 17112 - 19307 (-)
Gene ID: HRGMv2_2310_56_16
Type: TC
Location: 19338 - 20174 (-)
Type: TC
Location: 19338 - 20174 (-)
Gene ID: HRGMv2_2310_56_17
Type: TC
Location: 20184 - 21080 (-)
Type: TC
Location: 20184 - 21080 (-)
Gene ID: HRGMv2_2310_56_18
Type: TC
Location: 21093 - 22124 (-)
Type: TC
Location: 21093 - 22124 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900541255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.