Cluster: HRGMv2_2310_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2310
- CGC Family ID: CGCFAM_04274
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2310_5 | HRGMv2_2310_5_22 | 24245 | 25855 | + | 2.A.35.2.1 |
| TC | HRGMv2_2310_5 | HRGMv2_2310_5_23 | 25859 | 27595 | - | 3.A.1.106.2 |
| CAZyme | HRGMv2_2310_5 | HRGMv2_2310_5_24 | 27909 | 28904 | + | GH25 |
Gene ID: HRGMv2_2310_5_22
Type: TC
Location: 24245 - 25855 (+)
Type: TC
Location: 24245 - 25855 (+)
Gene ID: HRGMv2_2310_5_23
Type: TC
Location: 25859 - 27595 (-)
Type: TC
Location: 25859 - 27595 (-)
Gene ID: HRGMv2_2310_5_24
Type: CAZyme
Location: 27909 - 28904 (+)
Type: CAZyme
Location: 27909 - 28904 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900541255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.