Genome Details
Selected Rep_genome_ID: HRGMv2_2106
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900545725
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A89.bin_11 | 3,109,213 | 98.41% | 0.17% | China(Inner Mongolia) | Asia | IMGG |
| CGMR050270 | 2,751,519 | 97.65% | 0.17% | China | Asia | CGMR |
| HRGMv2_2106 | 2,876,069 | 98.65% | 0% | South Korea | Asia | HRGM |
| MGYG000004385 | 2,735,315 | 98.66% | 0% | Israel | Asia | UHGG |
| Rep_2365 | 2,794,150 | 98.8255% | 0.167785% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2106_CGC2 | CGCFAM_00036 | Yes | 25 | 13 | |
| HRGMv2_2106_CGC11 | CGCFAM_00159 | Yes | 4 | 1 | |
| HRGMv2_2106_CGC1 | CGCFAM_00491 | Yes | 12 | 7 | |
| HRGMv2_2106_CGC4 | CGCFAM_00622 | Yes | 9 | 1 | |
| HRGMv2_2106_CGC7 | CGCFAM_00905 | Yes | 13 | 3 | |
| HRGMv2_2106_CGC3 | CGCFAM_01402 | Yes | 3 | 1 | |
| HRGMv2_2106_CGC6 | CGCFAM_01465 | Yes | 4 | 1 | |
| HRGMv2_2106_CGC17 | CGCFAM_01575 | Yes | 7 | 1 | |
| HRGMv2_2106_CGC18 | CGCFAM_02080 | Yes | 5 | 1 | |
| HRGMv2_2106_CGC22 | CGCFAM_02258 | Yes | 5 | 1 | |
| HRGMv2_2106_CGC16 | CGCFAM_05774 | Yes | 3 | 1 | |
| HRGMv2_2106_CGC14 | CGCFAM_08447 | Yes | 3 | 1 | |
| HRGMv2_2106_CGC20 | CGCFAM_09958 | Yes | 5 | 1 | |
| HRGMv2_2106_CGC8 | CGCFAM_09959 | Yes | 5 | 1 |
Top CAZyme Families