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Cluster: HRGMv2_2106_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2106_2 HRGMv2_2106_2_142 169177 170475 + GT2
TC HRGMv2_2106_2 HRGMv2_2106_2_143 170597 171076 - 2.A.87.3.1
pfam HRGMv2_2106_2 HRGMv2_2106_2_144 171247 171705 - NusG_II
TC HRGMv2_2106_2 HRGMv2_2106_2_145 172086 172886 - 3.D.6.1.2
TC HRGMv2_2106_2 HRGMv2_2106_2_146 172905 173477 - 3.D.6.1.2
TC HRGMv2_2106_2 HRGMv2_2106_2_147 173593 174258 - 3.D.6.1.2
TC HRGMv2_2106_2 HRGMv2_2106_2_148 174251 174901 - 3.D.6.1.2
TC HRGMv2_2106_2 HRGMv2_2106_2_149 174901 175860 - 3.D.6.1.2
TC HRGMv2_2106_2 HRGMv2_2106_2_150 175877 177193 - 3.D.6.1.2
Gene ID: HRGMv2_2106_2_142
Type: CAZyme
Location: 169177 - 170475 (+)
Gene ID: HRGMv2_2106_2_143
Type: TC
Location: 170597 - 171076 (-)
Gene ID: HRGMv2_2106_2_144
Type: pfam
Location: 171247 - 171705 (-)
Gene ID: HRGMv2_2106_2_145
Type: TC
Location: 172086 - 172886 (-)
Gene ID: HRGMv2_2106_2_146
Type: TC
Location: 172905 - 173477 (-)
Gene ID: HRGMv2_2106_2_147
Type: TC
Location: 173593 - 174258 (-)
Gene ID: HRGMv2_2106_2_148
Type: TC
Location: 174251 - 174901 (-)
Gene ID: HRGMv2_2106_2_149
Type: TC
Location: 174901 - 175860 (-)
Gene ID: HRGMv2_2106_2_150
Type: TC
Location: 175877 - 177193 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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