Cluster: HRGMv2_2106_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2106
- CGC Family ID: CGCFAM_00159
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2106_10 | HRGMv2_2106_10_37 | 53173 | 54564 | + | 2.A.2.3.1 |
| CAZyme | HRGMv2_2106_10 | HRGMv2_2106_10_38 | 54781 | 56616 | + | GH2 |
| TC | HRGMv2_2106_10 | HRGMv2_2106_10_39 | 56967 | 57326 | + | 1.E.14.1.17 |
| TC | HRGMv2_2106_10 | HRGMv2_2106_10_40 | 57479 | 58168 | + | 2.A.122.1.4 |
Gene ID: HRGMv2_2106_10_37
Type: TC
Location: 53173 - 54564 (+)
Type: TC
Location: 53173 - 54564 (+)
Gene ID: HRGMv2_2106_10_38
Type: CAZyme
Location: 54781 - 56616 (+)
Type: CAZyme
Location: 54781 - 56616 (+)
Gene ID: HRGMv2_2106_10_39
Type: TC
Location: 56967 - 57326 (+)
Type: TC
Location: 56967 - 57326 (+)
Gene ID: HRGMv2_2106_10_40
Type: TC
Location: 57479 - 58168 (+)
Type: TC
Location: 57479 - 58168 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900545725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.