Cluster: HRGMv2_2106_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2106
- CGC Family ID: CGCFAM_01465
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2106_7 | HRGMv2_2106_7_68 | 71636 | 73483 | - | GH13_11 |
| pfam | HRGMv2_2106_7 | HRGMv2_2106_7_69 | 73764 | 74864 | - | Radical_SAM | Fer4_12 |
| peptidase | HRGMv2_2106_7 | HRGMv2_2106_7_70 | 74920 | 75735 | - | S14.UPW |
| TC | HRGMv2_2106_7 | HRGMv2_2106_7_71 | 76120 | 76878 | + | 3.A.1.16.1 |
Gene ID: HRGMv2_2106_7_68
Type: CAZyme
Location: 71636 - 73483 (-)
Type: CAZyme
Location: 71636 - 73483 (-)
Gene ID: HRGMv2_2106_7_69
Type: pfam
Location: 73764 - 74864 (-)
Type: pfam
Location: 73764 - 74864 (-)
Gene ID: HRGMv2_2106_7_70
Type: peptidase
Location: 74920 - 75735 (-)
Type: peptidase
Location: 74920 - 75735 (-)
Gene ID: HRGMv2_2106_7_71
Type: TC
Location: 76120 - 76878 (+)
Type: TC
Location: 76120 - 76878 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900545725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.