Cluster: HRGMv2_2106_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2106
- CGC Family ID: CGCFAM_02080
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2106_22 | HRGMv2_2106_22_19 | 29622 | 31124 | + | 1.B.52.2.1 |
| pfam | HRGMv2_2106_22 | HRGMv2_2106_22_20 | 31168 | 32400 | + | DUF1015 |
| peptidase | HRGMv2_2106_22 | HRGMv2_2106_22_21 | 32624 | 33478 | + | S09.UPW |
| CAZyme | HRGMv2_2106_22 | HRGMv2_2106_22_22 | 33599 | 35989 | + | CBM48 | GH13_9 |
| TC | HRGMv2_2106_22 | HRGMv2_2106_22_23 | 36113 | 36991 | + | 1.A.23.2.2 |
Gene ID: HRGMv2_2106_22_19
Type: TC
Location: 29622 - 31124 (+)
Type: TC
Location: 29622 - 31124 (+)
Gene ID: HRGMv2_2106_22_20
Type: pfam
Location: 31168 - 32400 (+)
Type: pfam
Location: 31168 - 32400 (+)
Gene ID: HRGMv2_2106_22_21
Type: peptidase
Location: 32624 - 33478 (+)
Type: peptidase
Location: 32624 - 33478 (+)
Gene ID: HRGMv2_2106_22_22
Type: CAZyme
Location: 33599 - 35989 (+)
Type: CAZyme
Location: 33599 - 35989 (+)
Gene ID: HRGMv2_2106_22_23
Type: TC
Location: 36113 - 36991 (+)
Type: TC
Location: 36113 - 36991 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900545725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.