Cluster: HRGMv2_2106_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2106
- CGC Family ID: CGCFAM_02258
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2106_28 | HRGMv2_2106_28_15 | 12253 | 14163 | + | 3.A.16.1.2 |
| CAZyme | HRGMv2_2106_28 | HRGMv2_2106_28_16 | 14591 | 16705 | + | GH13_39 |
| pfam | HRGMv2_2106_28 | HRGMv2_2106_28_17 | 16749 | 17669 | + | Lipase_GDSL | Lipase_GDSL_2 |
| pfam | HRGMv2_2106_28 | HRGMv2_2106_28_18 | 17669 | 18382 | + | tRNA_m1G_MT |
| TC | HRGMv2_2106_28 | HRGMv2_2106_28_19 | 18993 | 20768 | + | 9.B.34.1.3 |
Gene ID: HRGMv2_2106_28_15
Type: TC
Location: 12253 - 14163 (+)
Type: TC
Location: 12253 - 14163 (+)
Gene ID: HRGMv2_2106_28_16
Type: CAZyme
Location: 14591 - 16705 (+)
Type: CAZyme
Location: 14591 - 16705 (+)
Gene ID: HRGMv2_2106_28_17
Type: pfam
Location: 16749 - 17669 (+)
Type: pfam
Location: 16749 - 17669 (+)
Gene ID: HRGMv2_2106_28_18
Type: pfam
Location: 17669 - 18382 (+)
Type: pfam
Location: 17669 - 18382 (+)
Gene ID: HRGMv2_2106_28_19
Type: TC
Location: 18993 - 20768 (+)
Type: TC
Location: 18993 - 20768 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900545725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.