Cluster: HRGMv2_2106_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2106
- CGC Family ID: CGCFAM_01402
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2106_2 | HRGMv2_2106_2_134 | 158772 | 159839 | - | GH23 |
| pfam | HRGMv2_2106_2 | HRGMv2_2106_2_135 | 159933 | 161450 | - | Transpeptidase | PBP_dimer_2 |
| TC | HRGMv2_2106_2 | HRGMv2_2106_2_136 | 161389 | 162744 | - | 2.A.103.1.7 |
Gene ID: HRGMv2_2106_2_134
Type: CAZyme
Location: 158772 - 159839 (-)
Type: CAZyme
Location: 158772 - 159839 (-)
Gene ID: HRGMv2_2106_2_135
Type: pfam
Location: 159933 - 161450 (-)
Type: pfam
Location: 159933 - 161450 (-)
Gene ID: HRGMv2_2106_2_136
Type: TC
Location: 161389 - 162744 (-)
Type: TC
Location: 161389 - 162744 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900545725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.