Genome Details
Selected Rep_genome_ID: HRGMv2_0401
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0401 | 3,423,588 | 98.88% | 0.37% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0401_CGC15 | CGCFAM_00034 | Yes | 8 | 5 | |
| HRGMv2_0401_CGC30 | CGCFAM_00048 | Yes | 9 | 3 | |
| HRGMv2_0401_CGC14 | CGCFAM_00082 | Yes | 13 | 5 | beta-mannan |
| HRGMv2_0401_CGC21 | CGCFAM_00136 | Yes | 4 | 1 | pectin |
| HRGMv2_0401_CGC27 | CGCFAM_00136 | Yes | 10 | 5 | pectin |
| HRGMv2_0401_CGC11 | CGCFAM_00482 | Yes | 6 | 3 | fructan |
| HRGMv2_0401_CGC37 | CGCFAM_00513 | Yes | 5 | 3 | |
| HRGMv2_0401_CGC3 | CGCFAM_00552 | Yes | 7 | 4 | |
| HRGMv2_0401_CGC13 | CGCFAM_01841 | Yes | 4 | 1 | |
| HRGMv2_0401_CGC6 | CGCFAM_02620 | Yes | 8 | 2 | |
| HRGMv2_0401_CGC31 | CGCFAM_03240 | Yes | 7 | 1 | |
| HRGMv2_0401_CGC35 | CGCFAM_03440 | Yes | 4 | 1 | |
| HRGMv2_0401_CGC23 | CGCFAM_03865 | Yes | 34 | 17 | |
| HRGMv2_0401_CGC1 | CGCFAM_03977 | Yes | 8 | 1 | |
| HRGMv2_0401_CGC33 | CGCFAM_03978 | Yes | 5 | 1 | |
| HRGMv2_0401_CGC36 | CGCFAM_04347 | Yes | 6 | 2 | |
| HRGMv2_0401_CGC32 | CGCFAM_05882 | Yes | 5 | 1 | |
| HRGMv2_0401_CGC5 | CGCFAM_09265 | Yes | 7 | 6 | |
| HRGMv2_0401_CGC20 | CGCFAM_09652 | Yes | 10 | 2 | |
| HRGMv2_0401_CGC4 | CGCFAM_09653 | Yes | 9 | 1 |
Top CAZyme Families