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Cluster: HRGMv2_0401_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0401_1 HRGMv2_0401_1_124 186818 188170 + GH16_3
CAZyme HRGMv2_0401_1 HRGMv2_0401_1_125 188215 190455 + GH3
CAZyme HRGMv2_0401_1 HRGMv2_0401_1_126 190486 192744 + GH3
pfam HRGMv2_0401_1 HRGMv2_0401_1_127 192872 194608 + DUF6377
CAZyme HRGMv2_0401_1 HRGMv2_0401_1_128 195162 197405 + GH31_3
STP HRGMv2_0401_1 HRGMv2_0401_1_129 197705 200737 + B12-binding | B12-binding_2
TC HRGMv2_0401_1 HRGMv2_0401_1_130 200988 202592 + 2.A.21.3.19
Gene ID: HRGMv2_0401_1_124
Type: CAZyme
Location: 186818 - 188170 (+)
Gene ID: HRGMv2_0401_1_125
Type: CAZyme
Location: 188215 - 190455 (+)
Gene ID: HRGMv2_0401_1_126
Type: CAZyme
Location: 190486 - 192744 (+)
Gene ID: HRGMv2_0401_1_127
Type: pfam
Location: 192872 - 194608 (+)
Gene ID: HRGMv2_0401_1_128
Type: CAZyme
Location: 195162 - 197405 (+)
Gene ID: HRGMv2_0401_1_129
Type: STP
Location: 197705 - 200737 (+)
Gene ID: HRGMv2_0401_1_130
Type: TC
Location: 200988 - 202592 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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