dbCAN Logo

Cluster: HRGMv2_0401_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0401_7 HRGMv2_0401_7_57 79194 81107 - GH13_46
CAZyme HRGMv2_0401_7 HRGMv2_0401_7_58 81175 83088 - GH13_14
CAZyme HRGMv2_0401_7 HRGMv2_0401_7_59 83208 85328 - GH97
CAZyme HRGMv2_0401_7 HRGMv2_0401_7_60 85437 88136 - GH77
TC HRGMv2_0401_7 HRGMv2_0401_7_61 88350 89090 - 9.B.196.1.2
NULL(UNKNOWN) HRGMv2_0401_7 HRGMv2_0401_7_62 89270 89860 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0401_7 HRGMv2_0401_7_63 89892 90299 + DUF4878
CAZyme HRGMv2_0401_7 HRGMv2_0401_7_64 90398 92434 - GH13_6
Gene ID: HRGMv2_0401_7_57
Type: CAZyme
Location: 79194 - 81107 (-)
Gene ID: HRGMv2_0401_7_58
Type: CAZyme
Location: 81175 - 83088 (-)
Gene ID: HRGMv2_0401_7_59
Type: CAZyme
Location: 83208 - 85328 (-)
Gene ID: HRGMv2_0401_7_60
Type: CAZyme
Location: 85437 - 88136 (-)
Gene ID: HRGMv2_0401_7_61
Type: TC
Location: 88350 - 89090 (-)
Gene ID: HRGMv2_0401_7_62
Type:
Location: 89270 - 89860 (+)
Gene ID: HRGMv2_0401_7_63
Type: pfam
Location: 89892 - 90299 (+)
Gene ID: HRGMv2_0401_7_64
Type: CAZyme
Location: 90398 - 92434 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0401_7_62 vegetarian > vegan 1.26962 0.01548

🧭 Explore Read Mapping of CGC

← Back to Cluster List