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Cluster: HRGMv2_0401_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0401_2 HRGMv2_0401_2_121 150019 151146 - 9.B.146.1.4
peptidase HRGMv2_0401_2 HRGMv2_0401_2_122 151454 152743 + M26.UPW
TC HRGMv2_0401_2 HRGMv2_0401_2_123 152827 154935 + 2.A.7.3.49
pfam HRGMv2_0401_2 HRGMv2_0401_2_124 156079 156342 - rve
pfam HRGMv2_0401_2 HRGMv2_0401_2_125 156721 156936 - HTH_Tnp_1
CAZyme HRGMv2_0401_2 HRGMv2_0401_2_126 156987 158147 - GT4
NULL(UNKNOWN) HRGMv2_0401_2 HRGMv2_0401_2_127 158158 159339 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0401_2 HRGMv2_0401_2_128 159353 160141 - GT2
Gene ID: HRGMv2_0401_2_121
Type: TC
Location: 150019 - 151146 (-)
Gene ID: HRGMv2_0401_2_122
Type: peptidase
Location: 151454 - 152743 (+)
Gene ID: HRGMv2_0401_2_123
Type: TC
Location: 152827 - 154935 (+)
Gene ID: HRGMv2_0401_2_124
Type: pfam
Location: 156079 - 156342 (-)
Gene ID: HRGMv2_0401_2_125
Type: pfam
Location: 156721 - 156936 (-)
Gene ID: HRGMv2_0401_2_126
Type: CAZyme
Location: 156987 - 158147 (-)
Gene ID: HRGMv2_0401_2_127
Type:
Location: 158158 - 159339 (-)
Gene ID: HRGMv2_0401_2_128
Type: CAZyme
Location: 159353 - 160141 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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