dbCAN Logo

Cluster: HRGMv2_0401_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0401_10 HRGMv2_0401_10_47 48547 48873 + 2.A.7.1.4
TC HRGMv2_0401_10 HRGMv2_0401_10_48 48887 50068 + 2.A.1.36.3
NULL(UNKNOWN) HRGMv2_0401_10 HRGMv2_0401_10_49 50392 50610 + NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0401_10 HRGMv2_0401_10_50 50825 52180 + M20.UPF
CAZyme HRGMv2_0401_10 HRGMv2_0401_10_51 52399 53466 - GH43_29
NULL(UNKNOWN) HRGMv2_0401_10 HRGMv2_0401_10_52 53953 54552 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0401_10 HRGMv2_0401_10_53 54832 56376 + PL1_2
pfam HRGMv2_0401_10 HRGMv2_0401_10_54 56574 57086 - Lipocalin | Lipocalin_2
NULL(UNKNOWN) HRGMv2_0401_10 HRGMv2_0401_10_55 57344 58660 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0401_10 HRGMv2_0401_10_56 58830 59858 + 9.B.33.1.2
Gene ID: HRGMv2_0401_10_47
Type: TC
Location: 48547 - 48873 (+)
Gene ID: HRGMv2_0401_10_48
Type: TC
Location: 48887 - 50068 (+)
Gene ID: HRGMv2_0401_10_49
Type:
Location: 50392 - 50610 (+)
Gene ID: HRGMv2_0401_10_50
Type: peptidase
Location: 50825 - 52180 (+)
Gene ID: HRGMv2_0401_10_51
Type: CAZyme
Location: 52399 - 53466 (-)
Gene ID: HRGMv2_0401_10_52
Type:
Location: 53953 - 54552 (+)
Gene ID: HRGMv2_0401_10_53
Type: CAZyme
Location: 54832 - 56376 (+)
Gene ID: HRGMv2_0401_10_54
Type: pfam
Location: 56574 - 57086 (-)
Gene ID: HRGMv2_0401_10_55
Type:
Location: 57344 - 58660 (+)
Gene ID: HRGMv2_0401_10_56
Type: TC
Location: 58830 - 59858 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List