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Genome Details

Selected Rep_genome_ID: HRGMv2_0218
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp900767615
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
GH207_maxbin.001_sub 3,312,358 93.63% 2.16% NA Africa H3AfricaPhase2
HRGMv2_0218 3,108,542 94.17% 0.658% Ethiopia Africa HRGM
SW222_maxbin.008 3,309,175 90.76% 3.75% NA Africa H3AfricaPhase2
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0218_CGC12 CGCFAM_00001 Yes 7 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0218_CGC28 CGCFAM_00001 Yes 7 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0218_CGC9 CGCFAM_00017 Yes 8 2 fructan
PUL0765_HRGMv2_0218_C1 CGCFAM_00017 Yes 8 2 fructan
HRGMv2_0218_CGC33 CGCFAM_00059 Yes 9 1
HRGMv2_0218_CGC15 CGCFAM_00108 Yes 6 3 pectin
HRGMv2_0218_CGC32 CGCFAM_00116 Yes 9 3 xylan/beta-glucan
HRGMv2_0218_CGC16 CGCFAM_00180 Yes 11 7
HRGMv2_0218_CGC37 CGCFAM_00239 Yes 8 4 xylan
HRGMv2_0218_CGC18 CGCFAM_00241 Yes 5 3
HRGMv2_0218_CGC49 CGCFAM_00310 Yes 4 1
HRGMv2_0218_CGC40 CGCFAM_00352 Yes 5 1
HRGMv2_0218_CGC22 CGCFAM_00444 Yes 5 2
HRGMv2_0218_CGC47 CGCFAM_00721 Yes 3 1
HRGMv2_0218_CGC27 CGCFAM_00900 Yes 7 3
HRGMv2_0218_CGC3 CGCFAM_01216 Yes 4 2
HRGMv2_0218_CGC8 CGCFAM_01240 Yes 4 3 beta-glucan
HRGMv2_0218_CGC20 CGCFAM_01566 Yes 4 2
HRGMv2_0218_CGC21 CGCFAM_01638 Yes 9 3
HRGMv2_0218_CGC14 CGCFAM_02565 Yes 10 6
HRGMv2_0218_CGC24 CGCFAM_02608 Yes 3 1
PUL0766_HRGMv2_0218_C5 CGCFAM_02924 Yes 4 1 alpha-glucan
HRGMv2_0218_CGC45 CGCFAM_03209 Yes 4 1
HRGMv2_0218_CGC26 CGCFAM_03361 Yes 5 1
HRGMv2_0218_CGC13 CGCFAM_04802 Yes 7 3
Top CAZyme Families