Cluster: PUL0765_HRGMv2_0218_C1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate: fructan
- Genome ID: HRGMv2_0218
- CGC Family ID: CGCFAM_00017
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0765_HRGMv2_0218_C1 | HRGMv2_0218_6_24 | 32697 | 34625 | + | GH32 |
| pfam | PUL0765_HRGMv2_0218_C1 | HRGMv2_0218_6_25 | 34751 | 36517 | + | PDDEXK_9 | AAA-ATPase_like |
| TF | PUL0765_HRGMv2_0218_C1 | HRGMv2_0218_6_26 | 36523 | 38028 | + | HTH_AraC |
| TC | PUL0765_HRGMv2_0218_C1 | HRGMv2_0218_6_27 | 38209 | 41322 | + | 1.B.14.6.1 |
| pfam | PUL0765_HRGMv2_0218_C1 | HRGMv2_0218_6_28 | 41353 | 43089 | + | SusD_RagB | SusD-like_3 |
| CAZyme | PUL0765_HRGMv2_0218_C1 | HRGMv2_0218_6_29 | 43128 | 44846 | + | GH32 |
| TC | PUL0765_HRGMv2_0218_C1 | HRGMv2_0218_6_31 | 45011 | 46162 | + | 2.A.1.7.17 |
| STP | PUL0765_HRGMv2_0218_C1 | HRGMv2_0218_6_32 | 46229 | 47119 | + | PfkB |
Gene ID: HRGMv2_0218_6_24
Type: CAZyme
Location: 32697 - 34625 (+)
Type: CAZyme
Location: 32697 - 34625 (+)
Gene ID: HRGMv2_0218_6_25
Type: pfam
Location: 34751 - 36517 (+)
Type: pfam
Location: 34751 - 36517 (+)
Gene ID: HRGMv2_0218_6_26
Type: TF
Location: 36523 - 38028 (+)
Type: TF
Location: 36523 - 38028 (+)
Gene ID: HRGMv2_0218_6_27
Type: TC
Location: 38209 - 41322 (+)
Type: TC
Location: 38209 - 41322 (+)
Gene ID: HRGMv2_0218_6_28
Type: pfam
Location: 41353 - 43089 (+)
Type: pfam
Location: 41353 - 43089 (+)
Gene ID: HRGMv2_0218_6_29
Type: CAZyme
Location: 43128 - 44846 (+)
Type: CAZyme
Location: 43128 - 44846 (+)
Gene ID: HRGMv2_0218_6_31
Type: TC
Location: 45011 - 46162 (+)
Type: TC
Location: 45011 - 46162 (+)
Gene ID: HRGMv2_0218_6_32
Type: STP
Location: 46229 - 47119 (+)
Type: STP
Location: 46229 - 47119 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900767615
Gene Composition
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