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Cluster: HRGMv2_0218_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0218_49 HRGMv2_0218_49_7 7029 7889 + GH25
pfam HRGMv2_0218_49 HRGMv2_0218_49_8 7983 8852 - Ubie_methyltran | MTS | PrmA | Methyltransf_11 | Methyltransf_25 | Methyltransf_31
NULL(UNKNOWN) HRGMv2_0218_49 HRGMv2_0218_49_9 9145 10134 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0218_49 HRGMv2_0218_49_10 10294 11898 + 1.B.9.4.2
TC HRGMv2_0218_49 HRGMv2_0218_49_11 12384 12542 - 2.A.72.1.3
STP HRGMv2_0218_49 HRGMv2_0218_49_12 12563 13096 - cNMP_binding
TC HRGMv2_0218_49 HRGMv2_0218_49_13 13356 13682 + 2.A.7.1.4
TC HRGMv2_0218_49 HRGMv2_0218_49_14 13700 14905 + 2.A.1.36.3
TC HRGMv2_0218_49 HRGMv2_0218_49_15 14926 16887 - 2.A.72.1.3
Gene ID: HRGMv2_0218_49_7
Type: CAZyme
Location: 7029 - 7889 (+)
Gene ID: HRGMv2_0218_49_8
Type: pfam
Location: 7983 - 8852 (-)
Gene ID: HRGMv2_0218_49_9
Type:
Location: 9145 - 10134 (+)
Gene ID: HRGMv2_0218_49_10
Type: TC
Location: 10294 - 11898 (+)
Gene ID: HRGMv2_0218_49_11
Type: TC
Location: 12384 - 12542 (-)
Gene ID: HRGMv2_0218_49_12
Type: STP
Location: 12563 - 13096 (-)
Gene ID: HRGMv2_0218_49_13
Type: TC
Location: 13356 - 13682 (+)
Gene ID: HRGMv2_0218_49_14
Type: TC
Location: 13700 - 14905 (+)
Gene ID: HRGMv2_0218_49_15
Type: TC
Location: 14926 - 16887 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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