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Cluster: HRGMv2_0218_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0218_31 HRGMv2_0218_31_8 14012 15043 + 2.A.7.6.1
pfam HRGMv2_0218_31 HRGMv2_0218_31_9 15078 15374 + rhaM
pfam HRGMv2_0218_31 HRGMv2_0218_31_10 15487 16296 - Aldolase_II
CAZyme HRGMv2_0218_31 HRGMv2_0218_31_11 16631 19207 + GH106
CAZyme HRGMv2_0218_31 HRGMv2_0218_31_12 19304 20431 + GH105
CAZyme HRGMv2_0218_31 HRGMv2_0218_31_13 20454 21845 + GH28
TC HRGMv2_0218_31 HRGMv2_0218_31_14 22020 22769 + 3.A.1.122.2
Gene ID: HRGMv2_0218_31_8
Type: TC
Location: 14012 - 15043 (+)
Gene ID: HRGMv2_0218_31_9
Type: pfam
Location: 15078 - 15374 (+)
Gene ID: HRGMv2_0218_31_10
Type: pfam
Location: 15487 - 16296 (-)
Gene ID: HRGMv2_0218_31_11
Type: CAZyme
Location: 16631 - 19207 (+)
Gene ID: HRGMv2_0218_31_12
Type: CAZyme
Location: 19304 - 20431 (+)
Gene ID: HRGMv2_0218_31_13
Type: CAZyme
Location: 20454 - 21845 (+)
Gene ID: HRGMv2_0218_31_14
Type: TC
Location: 22020 - 22769 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0218_31_9 vegetarian > vegan 2.29615 0.00972

🧭 Explore Read Mapping of CGC

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