dbCAN Logo

Cluster: HRGMv2_0218_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0218_58 HRGMv2_0218_58_4 2108 4018 + CE1 | CE6
NULL(UNKNOWN) HRGMv2_0218_58 HRGMv2_0218_58_5 3958 4167 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0218_58 HRGMv2_0218_58_6 4273 7374 + 1.B.14.6.1
pfam HRGMv2_0218_58 HRGMv2_0218_58_7 7393 9198 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0218_58 HRGMv2_0218_58_8 9315 11834 + GH43_2 | GH8
NULL(UNKNOWN) HRGMv2_0218_58 HRGMv2_0218_58_9 11847 12551 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0218_58 HRGMv2_0218_58_10 12572 14062 + GH43_7
CAZyme HRGMv2_0218_58 HRGMv2_0218_58_11 14113 16719 + GH3
Gene ID: HRGMv2_0218_58_4
Type: CAZyme
Location: 2108 - 4018 (+)
Gene ID: HRGMv2_0218_58_5
Type:
Location: 3958 - 4167 (-)
Gene ID: HRGMv2_0218_58_6
Type: TC
Location: 4273 - 7374 (+)
Gene ID: HRGMv2_0218_58_7
Type: pfam
Location: 7393 - 9198 (+)
Gene ID: HRGMv2_0218_58_8
Type: CAZyme
Location: 9315 - 11834 (+)
Gene ID: HRGMv2_0218_58_9
Type:
Location: 11847 - 12551 (+)
Gene ID: HRGMv2_0218_58_10
Type: CAZyme
Location: 12572 - 14062 (+)
Gene ID: HRGMv2_0218_58_11
Type: CAZyme
Location: 14113 - 16719 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0218_58_7 vegetarian > vegan 1.14452 0.00972

🧭 Explore Read Mapping of CGC

← Back to Cluster List