PROTEIN: HRGMv2_0218_58_9
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Protein File & Metadata
Source:
HRGMv2_0218_58_9.pdb
Genome ID:
Protein ID:
HRGMv2_0218_58_9
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Protein Sequence
MNNFFNKIVR LFCLCVFLFG HSSADAQNKE LPVDINPYFG PVGKQPVVPN AAGFIQRWLL 60 LEPISVPVKS NVVFTDSYLK EIFHTQYFPK QMETVPKDGA VVKVGKEKLK WHALDSKLFN 120 VKLFRFATSF KKSKYGVLFW AVTVIDCPEE MKDVRLSVGS NGASMWWLNG EEAVMLEGDR 180 RMVRDDVVSK KLTLKKGRNI LRGAVINGPG MSDFCVRFID GLGKPVRNLS IHVK 234
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D4A750-F1-model_v4 | 43 | 234 | 116 | 283 | 0.3215 |
0.7126 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 33 | 234 | 379 | 701 | 0.5629 |
0.9825 |
| AF-D5EXY9-F1-model_v4 | CBM6 , GH43_2 | 32 | 234 | 382 | 700 | 0.5597 |
0.9706 |
| AF-D7SFH3-F1-model_v4 | GH43_2 | 32 | 234 | 482 | 697 | 0.5533 |
0.9578 |
| AF-A0A7G9XVI1-F1-model_v4 | GH43_2 , GH8 | 32 | 234 | 843 | 1048 | 0.5059 |
0.9575 |
| AF-A0A068NPW6-F1-model_v4 | GH0 | 17 | 234 | 11 | 214 | 0.4749 |
0.8349 |
| AF-A0A344TID5-F1-model_v4 | GH163 | 24 | 224 | 17 | 202 | 0.4281 |
0.8394 |
| AF-A0A2S0KVC0-F1-model_v4 | GH0 | 27 | 234 | 62 | 277 | 0.4265 |
0.8093 |
| A0A380YJ87 | GH20 | 15 | 234 | 354 | 837 | 0.4241 |
0.7079 |
| AF-A0A415S3H1-F1-model_v4 | GH20 | 15 | 234 | 354 | 837 | 0.4232 |
0.7075 |
| AF-A0A402CZV5-F1-model_v4 | GH4 | 49 | 223 | 458 | 622 | 0.4227 |
0.8607 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 33 | 234 | 379 | 701 | 0.5629 |
0.9825 |
| D7SFH3 | GH43_2 | 32 | 234 | 482 | 697 | 0.5533 |
0.9578 |
| A0A7G9XVI1 | GH43_2 , GH8 | 32 | 234 | 843 | 1048 | 0.5059 |
0.9575 |
| A0A344TID5 | GH163 | 24 | 224 | 17 | 202 | 0.4281 |
0.8394 |
| A0A380YJ87 | GH20 | 15 | 234 | 354 | 837 | 0.4241 |
0.7079 |
| A0A402CZV5 | GH4 | 49 | 223 | 458 | 622 | 0.4227 |
0.8607 |
| A0A921M789 | GH2 | 18 | 234 | 718 | 1112 | 0.4008 |
0.7192 |
| A0A1U9NQX6 | CBM51 , GH20 | 24 | 234 | 37 | 853 | 0.4006 |
0.6979 |
| A0A4V0I0Q3 | CBM51 , CBM67 | 2 | 234 | 2 | 770 | 0.4002 |
0.6243 |
| BCM93550.1 | GH2 | 42 | 234 | 948 | 1134 | 0.398 |
0.8231 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.