Genome Details
Selected Rep_genome_ID: HRGMv2_0184
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter sp900545915
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR000733 | 3,399,917 | 97.86% | 0% | China | Asia | CGMR |
| HRGMv2_0184 | 3,379,553 | 98.89% | 0% | UK | Europe | HRGM |
| MGYG000003282 | 3,080,391 | 93.58% | 0.38% | United States | North America | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0184_CGC55 | CGCFAM_00494 | Yes | 18 | 9 | |
| HRGMv2_0184_CGC15 | CGCFAM_00588 | Yes | 6 | 2 | |
| HRGMv2_0184_CGC50 | CGCFAM_00821 | Yes | 9 | 6 | pectin |
| HRGMv2_0184_CGC39 | CGCFAM_00822 | Yes | 8 | 2 | host glycan |
| HRGMv2_0184_CGC44 | CGCFAM_01254 | Yes | 10 | 6 | |
| HRGMv2_0184_CGC30 | CGCFAM_04500 | Yes | 8 | 1 | |
| HRGMv2_0184_CGC29 | CGCFAM_05228 | Yes | 20 | 8 | |
| HRGMv2_0184_CGC54 | CGCFAM_05229 | Yes | 10 | 4 | |
| HRGMv2_0184_CGC21 | CGCFAM_06502 | Yes | 12 | 4 | |
| HRGMv2_0184_CGC6 | CGCFAM_07963 | Yes | 6 | 2 | |
| HRGMv2_0184_CGC26 | CGCFAM_07964 | Yes | 7 | 1 | |
| HRGMv2_0184_CGC42 | CGCFAM_07965 | Yes | 12 | 1 | |
| HRGMv2_0184_CGC46 | CGCFAM_07967 | Yes | 6 | 2 | |
| HRGMv2_0184_CGC3 | CGCFAM_07968 | Yes | 9 | 1 | |
| HRGMv2_0184_CGC13 | CGCFAM_07969 | Yes | 5 | 1 | |
| HRGMv2_0184_CGC34 | CGCFAM_07971 | Yes | 17 | 5 | |
| HRGMv2_0184_CGC57 | CGCFAM_07972 | Yes | 5 | 1 | |
| HRGMv2_0184_CGC19 | CGCFAM_07974 | Yes | 11 | 1 | |
| HRGMv2_0184_CGC8 | CGCFAM_09526 | Yes | 4 | 1 |
Top CAZyme Families