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Cluster: HRGMv2_0184_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0184_18 HRGMv2_0184_18_40 45102 46472 - 2.A.66.1.32
pfam HRGMv2_0184_18 HRGMv2_0184_18_41 46575 47222 + Hydrolase | HAD | HAD_2
TC HRGMv2_0184_18 HRGMv2_0184_18_42 47219 48385 - 2.A.1.7.16
pfam HRGMv2_0184_18 HRGMv2_0184_18_43 48394 49218 - DAHP_synth_1
pfam HRGMv2_0184_18 HRGMv2_0184_18_44 49276 49977 - Methyltrans_RNA | PUA_4
TC HRGMv2_0184_18 HRGMv2_0184_18_45 49996 51315 - 2.A.41.2.11
TC HRGMv2_0184_18 HRGMv2_0184_18_46 51408 52673 - 2.A.1.10.2
pfam HRGMv2_0184_18 HRGMv2_0184_18_47 52797 53384 - BFN_dom
TC HRGMv2_0184_18 HRGMv2_0184_18_48 53569 54231 + 9.B.20.1.4
STP HRGMv2_0184_18 HRGMv2_0184_18_49 54263 55066 - NUDIX
pfam HRGMv2_0184_18 HRGMv2_0184_18_50 55206 55916 + Pirin | Pirin_C_2
CAZyme HRGMv2_0184_18 HRGMv2_0184_18_51 56188 58617 + GH95
Gene ID: HRGMv2_0184_18_40
Type: TC
Location: 45102 - 46472 (-)
Gene ID: HRGMv2_0184_18_41
Type: pfam
Location: 46575 - 47222 (+)
Gene ID: HRGMv2_0184_18_42
Type: TC
Location: 47219 - 48385 (-)
Gene ID: HRGMv2_0184_18_43
Type: pfam
Location: 48394 - 49218 (-)
Gene ID: HRGMv2_0184_18_44
Type: pfam
Location: 49276 - 49977 (-)
Gene ID: HRGMv2_0184_18_45
Type: TC
Location: 49996 - 51315 (-)
Gene ID: HRGMv2_0184_18_46
Type: TC
Location: 51408 - 52673 (-)
Gene ID: HRGMv2_0184_18_47
Type: pfam
Location: 52797 - 53384 (-)
Gene ID: HRGMv2_0184_18_48
Type: TC
Location: 53569 - 54231 (+)
Gene ID: HRGMv2_0184_18_49
Type: STP
Location: 54263 - 55066 (-)
Gene ID: HRGMv2_0184_18_50
Type: pfam
Location: 55206 - 55916 (+)
Gene ID: HRGMv2_0184_18_51
Type: CAZyme
Location: 56188 - 58617 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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