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Cluster: HRGMv2_0184_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0184_31 HRGMv2_0184_31_15 16910 18757 - 8.A.46.1.3
TC HRGMv2_0184_31 HRGMv2_0184_31_16 18792 22034 - 1.B.14.6.1
CAZyme HRGMv2_0184_31 HRGMv2_0184_31_17 22425 24059 - CBM91 | GH43_10
CAZyme HRGMv2_0184_31 HRGMv2_0184_31_18 24131 25108 - CE8
pfam HRGMv2_0184_31 HRGMv2_0184_31_19 25441 25647 - DUF2582
CAZyme HRGMv2_0184_31 HRGMv2_0184_31_20 26183 27400 - GH105
CAZyme HRGMv2_0184_31 HRGMv2_0184_31_21 27449 29311 - CE12
CAZyme HRGMv2_0184_31 HRGMv2_0184_31_22 29344 31992 - PL1_2
CAZyme HRGMv2_0184_31 HRGMv2_0184_31_23 32197 34713 - CE8
Gene ID: HRGMv2_0184_31_15
Type: TC
Location: 16910 - 18757 (-)
Gene ID: HRGMv2_0184_31_16
Type: TC
Location: 18792 - 22034 (-)
Gene ID: HRGMv2_0184_31_17
Type: CAZyme
Location: 22425 - 24059 (-)
Gene ID: HRGMv2_0184_31_18
Type: CAZyme
Location: 24131 - 25108 (-)
Gene ID: HRGMv2_0184_31_19
Type: pfam
Location: 25441 - 25647 (-)
Gene ID: HRGMv2_0184_31_20
Type: CAZyme
Location: 26183 - 27400 (-)
Gene ID: HRGMv2_0184_31_21
Type: CAZyme
Location: 27449 - 29311 (-)
Gene ID: HRGMv2_0184_31_22
Type: CAZyme
Location: 29344 - 31992 (-)
Gene ID: HRGMv2_0184_31_23
Type: CAZyme
Location: 32197 - 34713 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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