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Cluster: HRGMv2_0184_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0184_5 HRGMv2_0184_5_12 10062 10916 + 3.D.6.1.2
TC HRGMv2_0184_5 HRGMv2_0184_5_13 10975 12312 + 3.D.6.1.2
TC HRGMv2_0184_5 HRGMv2_0184_5_14 12334 13284 + 3.D.6.1.2
TC HRGMv2_0184_5 HRGMv2_0184_5_15 13277 13900 + 3.D.6.1.3
TC HRGMv2_0184_5 HRGMv2_0184_5_16 13916 14500 + 3.D.6.1.2
TC HRGMv2_0184_5 HRGMv2_0184_5_17 14504 15085 + 3.D.6.1.2
pfam HRGMv2_0184_5 HRGMv2_0184_5_18 15162 16313 - Cyt_bd_oxida_II
TC HRGMv2_0184_5 HRGMv2_0184_5_19 16320 17876 - 3.D.4.3.2
pfam HRGMv2_0184_5 HRGMv2_0184_5_20 17904 18146 - DUF4492
pfam HRGMv2_0184_5 HRGMv2_0184_5_21 18303 18809 - Ferritin | Rubrerythrin
CAZyme HRGMv2_0184_5 HRGMv2_0184_5_22 18976 22077 - GH30_4
Gene ID: HRGMv2_0184_5_12
Type: TC
Location: 10062 - 10916 (+)
Gene ID: HRGMv2_0184_5_13
Type: TC
Location: 10975 - 12312 (+)
Gene ID: HRGMv2_0184_5_14
Type: TC
Location: 12334 - 13284 (+)
Gene ID: HRGMv2_0184_5_15
Type: TC
Location: 13277 - 13900 (+)
Gene ID: HRGMv2_0184_5_16
Type: TC
Location: 13916 - 14500 (+)
Gene ID: HRGMv2_0184_5_17
Type: TC
Location: 14504 - 15085 (+)
Gene ID: HRGMv2_0184_5_18
Type: pfam
Location: 15162 - 16313 (-)
Gene ID: HRGMv2_0184_5_19
Type: TC
Location: 16320 - 17876 (-)
Gene ID: HRGMv2_0184_5_20
Type: pfam
Location: 17904 - 18146 (-)
Gene ID: HRGMv2_0184_5_21
Type: pfam
Location: 18303 - 18809 (-)
Gene ID: HRGMv2_0184_5_22
Type: CAZyme
Location: 18976 - 22077 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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