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Cluster: HRGMv2_0184_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0184_22 HRGMv2_0184_22_1 151 2310 + GH36
pfam HRGMv2_0184_22 HRGMv2_0184_22_2 2374 3702 + NHL | TIG
TC HRGMv2_0184_22 HRGMv2_0184_22_3 3737 6856 + 1.B.14.6.1
pfam HRGMv2_0184_22 HRGMv2_0184_22_4 6887 8929 + SusD_RagB | SusD-like_3
pfam HRGMv2_0184_22 HRGMv2_0184_22_5 8962 9918 + BT_3987-like_N | BT_3044-like_C
CAZyme HRGMv2_0184_22 HRGMv2_0184_22_6 10049 12301 + GH92
CAZyme HRGMv2_0184_22 HRGMv2_0184_22_7 12333 13751 + GH30_2
CAZyme HRGMv2_0184_22 HRGMv2_0184_22_8 13762 15183 + GH30_2
CAZyme HRGMv2_0184_22 HRGMv2_0184_22_9 15196 17763 + GH3
CAZyme HRGMv2_0184_22 HRGMv2_0184_22_10 17849 18847 + GH43_2
Gene ID: HRGMv2_0184_22_1
Type: CAZyme
Location: 151 - 2310 (+)
Gene ID: HRGMv2_0184_22_2
Type: pfam
Location: 2374 - 3702 (+)
Gene ID: HRGMv2_0184_22_3
Type: TC
Location: 3737 - 6856 (+)
Gene ID: HRGMv2_0184_22_4
Type: pfam
Location: 6887 - 8929 (+)
Gene ID: HRGMv2_0184_22_5
Type: pfam
Location: 8962 - 9918 (+)
Gene ID: HRGMv2_0184_22_6
Type: CAZyme
Location: 10049 - 12301 (+)
Gene ID: HRGMv2_0184_22_7
Type: CAZyme
Location: 12333 - 13751 (+)
Gene ID: HRGMv2_0184_22_8
Type: CAZyme
Location: 13762 - 15183 (+)
Gene ID: HRGMv2_0184_22_9
Type: CAZyme
Location: 15196 - 17763 (+)
Gene ID: HRGMv2_0184_22_10
Type: CAZyme
Location: 17849 - 18847 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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