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Cluster: HRGMv2_0184_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0184_34 HRGMv2_0184_34_20 19751 20350 + 2.A.95.1.4
STP HRGMv2_0184_34 HRGMv2_0184_34_21 20355 21341 + Fer4
NULL(UNKNOWN) HRGMv2_0184_34 HRGMv2_0184_34_22 21284 21532 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0184_34 HRGMv2_0184_34_23 21579 23525 + GH133
CAZyme HRGMv2_0184_34 HRGMv2_0184_34_24 23538 24800 + GT4
CAZyme HRGMv2_0184_34 HRGMv2_0184_34_25 24845 26224 + GH57
CAZyme HRGMv2_0184_34 HRGMv2_0184_34_26 26616 28529 - GH175
pfam HRGMv2_0184_34 HRGMv2_0184_34_27 28622 29704 - AA_kinase | PUA
pfam HRGMv2_0184_34 HRGMv2_0184_34_28 29720 30148 - DUF695
TC HRGMv2_0184_34 HRGMv2_0184_34_29 30159 31814 - 2.A.1.42.2
Gene ID: HRGMv2_0184_34_20
Type: TC
Location: 19751 - 20350 (+)
Gene ID: HRGMv2_0184_34_21
Type: STP
Location: 20355 - 21341 (+)
Gene ID: HRGMv2_0184_34_22
Type:
Location: 21284 - 21532 (+)
Gene ID: HRGMv2_0184_34_23
Type: CAZyme
Location: 21579 - 23525 (+)
Gene ID: HRGMv2_0184_34_24
Type: CAZyme
Location: 23538 - 24800 (+)
Gene ID: HRGMv2_0184_34_25
Type: CAZyme
Location: 24845 - 26224 (+)
Gene ID: HRGMv2_0184_34_26
Type: CAZyme
Location: 26616 - 28529 (-)
Gene ID: HRGMv2_0184_34_27
Type: pfam
Location: 28622 - 29704 (-)
Gene ID: HRGMv2_0184_34_28
Type: pfam
Location: 29720 - 30148 (-)
Gene ID: HRGMv2_0184_34_29
Type: TC
Location: 30159 - 31814 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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