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Cluster: HRGMv2_0184_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0184_1 HRGMv2_0184_1_65 76247 76825 - 4.B.1.1.1
pfam HRGMv2_0184_1 HRGMv2_0184_1_66 76980 78101 - GldN
TC HRGMv2_0184_1 HRGMv2_0184_1_67 78131 79696 - 9.A.25.1.1
TC HRGMv2_0184_1 HRGMv2_0184_1_68 79711 80733 - 9.A.25.1.1
TC HRGMv2_0184_1 HRGMv2_0184_1_69 80758 82173 - 9.A.25.1.1
pfam HRGMv2_0184_1 HRGMv2_0184_1_70 82177 83166 - PorP_SprF
CAZyme HRGMv2_0184_1 HRGMv2_0184_1_71 83486 85831 - GH92
NULL(UNKNOWN) HRGMv2_0184_1 HRGMv2_0184_1_72 85968 87437 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0184_1 HRGMv2_0184_1_73 87461 90298 - 1.B.14.12.3
Gene ID: HRGMv2_0184_1_65
Type: TC
Location: 76247 - 76825 (-)
Gene ID: HRGMv2_0184_1_66
Type: pfam
Location: 76980 - 78101 (-)
Gene ID: HRGMv2_0184_1_67
Type: TC
Location: 78131 - 79696 (-)
Gene ID: HRGMv2_0184_1_68
Type: TC
Location: 79711 - 80733 (-)
Gene ID: HRGMv2_0184_1_69
Type: TC
Location: 80758 - 82173 (-)
Gene ID: HRGMv2_0184_1_70
Type: pfam
Location: 82177 - 83166 (-)
Gene ID: HRGMv2_0184_1_71
Type: CAZyme
Location: 83486 - 85831 (-)
Gene ID: HRGMv2_0184_1_72
Type:
Location: 85968 - 87437 (-)
Gene ID: HRGMv2_0184_1_73
Type: TC
Location: 87461 - 90298 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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