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Cluster: HRGMv2_0184_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0184_15 HRGMv2_0184_15_44 51572 54913 + 1.B.14.6.13
pfam HRGMv2_0184_15 HRGMv2_0184_15_45 54933 56726 + SusD-like | SusD-like_2
CAZyme HRGMv2_0184_15 HRGMv2_0184_15_46 56812 59820 + GH85
STP HRGMv2_0184_15 HRGMv2_0184_15_47 60113 60706 - Sigma70_r2 | Sigma70_r4_2
STP HRGMv2_0184_15 HRGMv2_0184_15_48 61390 62421 + FecR
TC HRGMv2_0184_15 HRGMv2_0184_15_49 62565 66191 + 1.B.14.6.2
TC HRGMv2_0184_15 HRGMv2_0184_15_50 66204 67907 + 8.A.46.2.1
CAZyme HRGMv2_0184_15 HRGMv2_0184_15_51 67996 70476 + GH85
Gene ID: HRGMv2_0184_15_44
Type: TC
Location: 51572 - 54913 (+)
Gene ID: HRGMv2_0184_15_45
Type: pfam
Location: 54933 - 56726 (+)
Gene ID: HRGMv2_0184_15_46
Type: CAZyme
Location: 56812 - 59820 (+)
Gene ID: HRGMv2_0184_15_47
Type: STP
Location: 60113 - 60706 (-)
Gene ID: HRGMv2_0184_15_48
Type: STP
Location: 61390 - 62421 (+)
Gene ID: HRGMv2_0184_15_49
Type: TC
Location: 62565 - 66191 (+)
Gene ID: HRGMv2_0184_15_50
Type: TC
Location: 66204 - 67907 (+)
Gene ID: HRGMv2_0184_15_51
Type: CAZyme
Location: 67996 - 70476 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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