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Genome Details

Selected Rep_genome_ID: HRGMv2_0159
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR022562 6,590,407 95.63% 0.49% China Asia CGMR
HRGMv2_0159 6,814,694 99.19% 0.375% China Asia HRGM
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0159_CGC18 CGCFAM_00001 Yes 8 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0159_CGC25 CGCFAM_00003 Yes 5 1
HRGMv2_0159_CGC50 CGCFAM_00016 Yes 6 1 host glycan
HRGMv2_0159_CGC75 CGCFAM_00025 Yes 7 3 pectin/alpha-glucan
HRGMv2_0159_CGC63 CGCFAM_00043 Yes 5 2 alpha-glucan
PUL0205_HRGMv2_0159_C3 CGCFAM_00043 Yes 5 2 alpha-glucan
HRGMv2_0159_CGC39 CGCFAM_00044 Yes 14 6 beta-mannan/xylan/beta-glucan
PUL0045_HRGMv2_0159_C1 CGCFAM_00044 Yes 9 5 xylan
HRGMv2_0159_CGC27 - Yes 10 3 N/A
HRGMv2_0159_CGC13 CGCFAM_00062 Yes 8 3 beta-glucan
HRGMv2_0159_CGC52 CGCFAM_00158 Yes 9 1
HRGMv2_0159_CGC95 CGCFAM_00212 Yes 23 10 arabinogalactan/pectin
HRGMv2_0159_CGC93 CGCFAM_00238 Yes 23 14 xylan
HRGMv2_0159_CGC83 CGCFAM_00274 Yes 4 1
HRGMv2_0159_CGC102 CGCFAM_00297 Yes 13 4
HRGMv2_0159_CGC108 CGCFAM_00361 Yes 20 9
HRGMv2_0159_CGC121 CGCFAM_00363 Yes 13 5
HRGMv2_0159_CGC51 CGCFAM_00372 Yes 27 11
HRGMv2_0159_CGC12 CGCFAM_00375 Yes 10 5
HRGMv2_0159_CGC77 CGCFAM_00376 Yes 3 1 host glycan
HRGMv2_0159_CGC15 CGCFAM_00439 Yes 7 2 host glycan
HRGMv2_0159_CGC62 CGCFAM_00440 Yes 12 6
HRGMv2_0159_CGC9 CGCFAM_00461 Yes 6 1
HRGMv2_0159_CGC78 CGCFAM_00478 Yes 4 1
HRGMv2_0159_CGC70 CGCFAM_00480 Yes 7 5 pectin/host glycan
Top CAZyme Families