Cluster: HRGMv2_0159_CGC70
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate: pectin/host glycan
- Genome ID: HRGMv2_0159
- CGC Family ID: CGCFAM_00480
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0159_14 | HRGMv2_0159_14_163 | 191071 | 192870 | - | 8.A.46.1.1 |
| TC | HRGMv2_0159_14 | HRGMv2_0159_14_164 | 192885 | 195629 | - | 1.B.14.6.1 |
| CAZyme | HRGMv2_0159_14 | HRGMv2_0159_14_165 | 195827 | 197902 | - | GH20 |
| CAZyme | HRGMv2_0159_14 | HRGMv2_0159_14_166 | 197902 | 200226 | - | GH20 |
| CAZyme | HRGMv2_0159_14 | HRGMv2_0159_14_167 | 200261 | 202852 | - | GH2 |
| CAZyme | HRGMv2_0159_14 | HRGMv2_0159_14_168 | 202969 | 204516 | - | CE20 |
| CAZyme | HRGMv2_0159_14 | HRGMv2_0159_14_169 | 204724 | 206406 | - | CBM93 | GH33 |
Gene ID: HRGMv2_0159_14_163
Type: TC
Location: 191071 - 192870 (-)
Type: TC
Location: 191071 - 192870 (-)
Gene ID: HRGMv2_0159_14_164
Type: TC
Location: 192885 - 195629 (-)
Type: TC
Location: 192885 - 195629 (-)
Gene ID: HRGMv2_0159_14_165
Type: CAZyme
Location: 195827 - 197902 (-)
Type: CAZyme
Location: 195827 - 197902 (-)
Gene ID: HRGMv2_0159_14_166
Type: CAZyme
Location: 197902 - 200226 (-)
Type: CAZyme
Location: 197902 - 200226 (-)
Gene ID: HRGMv2_0159_14_167
Type: CAZyme
Location: 200261 - 202852 (-)
Type: CAZyme
Location: 200261 - 202852 (-)
Gene ID: HRGMv2_0159_14_168
Type: CAZyme
Location: 202969 - 204516 (-)
Type: CAZyme
Location: 202969 - 204516 (-)
Gene ID: HRGMv2_0159_14_169
Type: CAZyme
Location: 204724 - 206406 (-)
Type: CAZyme
Location: 204724 - 206406 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.