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Cluster: HRGMv2_0159_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0159_11 HRGMv2_0159_11_76 76294 77187 - 1.A.30.1.4
NULL(UNKNOWN) HRGMv2_0159_11 HRGMv2_0159_11_77 77356 77448 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0159_11 HRGMv2_0159_11_78 77488 79536 - GH2
sulfatase HRGMv2_0159_11 HRGMv2_0159_11_79 79538 80854 - S1_7
pfam HRGMv2_0159_11 HRGMv2_0159_11_80 81051 82865 - SusD_RagB | SusD-like_3
TC HRGMv2_0159_11 HRGMv2_0159_11_81 82894 86283 - 1.B.14.6.1
STP HRGMv2_0159_11 HRGMv2_0159_11_82 86413 87441 - FecR
STP HRGMv2_0159_11 HRGMv2_0159_11_83 87518 88105 - Sigma70_r2 | Sigma70_r4_2
TC HRGMv2_0159_11 HRGMv2_0159_11_84 88205 89659 - 2.A.68.1.2
Gene ID: HRGMv2_0159_11_76
Type: TC
Location: 76294 - 77187 (-)
Gene ID: HRGMv2_0159_11_77
Type:
Location: 77356 - 77448 (-)
Gene ID: HRGMv2_0159_11_78
Type: CAZyme
Location: 77488 - 79536 (-)
Gene ID: HRGMv2_0159_11_79
Type: sulfatase
Location: 79538 - 80854 (-)
Gene ID: HRGMv2_0159_11_80
Type: pfam
Location: 81051 - 82865 (-)
Gene ID: HRGMv2_0159_11_81
Type: TC
Location: 82894 - 86283 (-)
Gene ID: HRGMv2_0159_11_82
Type: STP
Location: 86413 - 87441 (-)
Gene ID: HRGMv2_0159_11_83
Type: STP
Location: 87518 - 88105 (-)
Gene ID: HRGMv2_0159_11_84
Type: TC
Location: 88205 - 89659 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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