Cluster: PUL0045_HRGMv2_0159_C1
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 5
- Substrate: xylan
- Genome ID: HRGMv2_0159
- CGC Family ID: CGCFAM_00044
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0045_HRGMv2_0159_C1 | HRGMv2_0159_7_35 | 55203 | 57344 | - | GH67 |
| CAZyme | PUL0045_HRGMv2_0159_C1 | HRGMv2_0159_7_36 | 57395 | 58372 | - | GH43_1 |
| CAZyme | PUL0045_HRGMv2_0159_C1 | HRGMv2_0159_7_37 | 58427 | 59563 | - | GH10 |
| CAZyme | PUL0045_HRGMv2_0159_C1 | HRGMv2_0159_7_39 | 61099 | 62745 | - | CE20 | CE20 |
| CAZyme | PUL0045_HRGMv2_0159_C1 | HRGMv2_0159_7_40 | 63078 | 65300 | - | CBM4 | GH10 |
| pfam | PUL0045_HRGMv2_0159_C1 | HRGMv2_0159_7_41 | 65325 | 66731 | - | SGBP_B_XBD |
| pfam | PUL0045_HRGMv2_0159_C1 | HRGMv2_0159_7_42 | 66746 | 68392 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0045_HRGMv2_0159_C1 | HRGMv2_0159_7_43 | 68412 | 71585 | - | 1.B.14.6.1 |
| TF | PUL0045_HRGMv2_0159_C1 | HRGMv2_0159_7_44 | 71984 | 76126 | + | HTH_AraC | HTH_AraC |
Gene ID: HRGMv2_0159_7_35
Type: CAZyme
Location: 55203 - 57344 (-)
Type: CAZyme
Location: 55203 - 57344 (-)
Gene ID: HRGMv2_0159_7_36
Type: CAZyme
Location: 57395 - 58372 (-)
Type: CAZyme
Location: 57395 - 58372 (-)
Gene ID: HRGMv2_0159_7_37
Type: CAZyme
Location: 58427 - 59563 (-)
Type: CAZyme
Location: 58427 - 59563 (-)
Gene ID: HRGMv2_0159_7_39
Type: CAZyme
Location: 61099 - 62745 (-)
Type: CAZyme
Location: 61099 - 62745 (-)
Gene ID: HRGMv2_0159_7_40
Type: CAZyme
Location: 63078 - 65300 (-)
Type: CAZyme
Location: 63078 - 65300 (-)
Gene ID: HRGMv2_0159_7_41
Type: pfam
Location: 65325 - 66731 (-)
Type: pfam
Location: 65325 - 66731 (-)
Gene ID: HRGMv2_0159_7_42
Type: pfam
Location: 66746 - 68392 (-)
Type: pfam
Location: 66746 - 68392 (-)
Gene ID: HRGMv2_0159_7_43
Type: TC
Location: 68412 - 71585 (-)
Type: TC
Location: 68412 - 71585 (-)
Gene ID: HRGMv2_0159_7_44
Type: TF
Location: 71984 - 76126 (+)
Type: TF
Location: 71984 - 76126 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Composition
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