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Cluster: HRGMv2_0159_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0159_2 HRGMv2_0159_2_173 239144 242329 + 1.B.14.6.1
pfam HRGMv2_0159_2 HRGMv2_0159_2_174 242341 244092 + SusD_RagB | SusD-like_3
TC HRGMv2_0159_2 HRGMv2_0159_2_175 244114 246903 + 1.B.14.6.1
pfam HRGMv2_0159_2 HRGMv2_0159_2_176 246932 248644 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0159_2 HRGMv2_0159_2_177 248670 249935 + CBM32
NULL(UNKNOWN) HRGMv2_0159_2 HRGMv2_0159_2_178 249976 251433 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0159_2 HRGMv2_0159_2_179 251529 255110 + GH2
CAZyme HRGMv2_0159_2 HRGMv2_0159_2_180 255139 257349 + GH92
CAZyme HRGMv2_0159_2 HRGMv2_0159_2_181 257377 259617 + GH92
CAZyme HRGMv2_0159_2 HRGMv2_0159_2_182 259640 261103 + GH30_1
Gene ID: HRGMv2_0159_2_173
Type: TC
Location: 239144 - 242329 (+)
Gene ID: HRGMv2_0159_2_174
Type: pfam
Location: 242341 - 244092 (+)
Gene ID: HRGMv2_0159_2_175
Type: TC
Location: 244114 - 246903 (+)
Gene ID: HRGMv2_0159_2_176
Type: pfam
Location: 246932 - 248644 (+)
Gene ID: HRGMv2_0159_2_177
Type: CAZyme
Location: 248670 - 249935 (+)
Gene ID: HRGMv2_0159_2_178
Type:
Location: 249976 - 251433 (+)
Gene ID: HRGMv2_0159_2_179
Type: CAZyme
Location: 251529 - 255110 (+)
Gene ID: HRGMv2_0159_2_180
Type: CAZyme
Location: 255139 - 257349 (+)
Gene ID: HRGMv2_0159_2_181
Type: CAZyme
Location: 257377 - 259617 (+)
Gene ID: HRGMv2_0159_2_182
Type: CAZyme
Location: 259640 - 261103 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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