Cluster: HRGMv2_0159_CGC51
🧬 Cluster Details
- Gene Count: 27
- CAZyme Count: 11
- Substrate:
- Genome ID: HRGMv2_0159
- CGC Family ID: CGCFAM_00372
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0159_10 | HRGMv2_0159_10_55 | 59874 | 61073 | + | GH88 |
| CAZyme | HRGMv2_0159_10 | HRGMv2_0159_10_56 | 61131 | 63734 | + | PL15_2 |
| NULL(UNKNOWN) | HRGMv2_0159_10 | HRGMv2_0159_10_57 | 63754 | 64635 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0159_10 | HRGMv2_0159_10_58 | 64671 | 66080 | + | GH29 |
| sulfatase | HRGMv2_0159_10 | HRGMv2_0159_10_59 | 66099 | 67499 | + | S1_14 |
| CAZyme | HRGMv2_0159_10 | HRGMv2_0159_10_60 | 67544 | 70306 | + | PL15 |
| TF | HRGMv2_0159_10 | HRGMv2_0159_10_61 | 70334 | 74305 | - | HTH_AraC |
| CAZyme | HRGMv2_0159_10 | HRGMv2_0159_10_62 | 74583 | 75788 | - | GH88 |
| CAZyme | HRGMv2_0159_10 | HRGMv2_0159_10_63 | 75829 | 78831 | - | PL8_3 |
| pfam | HRGMv2_0159_10 | HRGMv2_0159_10_64 | 79444 | 80277 | - | DUF1961 |
| pfam | HRGMv2_0159_10 | HRGMv2_0159_10_65 | 80290 | 81126 | - | DUF1961 |
| CAZyme | HRGMv2_0159_10 | HRGMv2_0159_10_66 | 81160 | 83700 | - | PL15 |
| pfam | HRGMv2_0159_10 | HRGMv2_0159_10_67 | 83817 | 85490 | - | DUF6562 |
| pfam | HRGMv2_0159_10 | HRGMv2_0159_10_68 | 85521 | 86570 | - | DUF6562 |
| TC | HRGMv2_0159_10 | HRGMv2_0159_10_69 | 86583 | 87386 | - | 9.B.171.1.2 |
| CAZyme | HRGMv2_0159_10 | HRGMv2_0159_10_70 | 87404 | 90010 | - | PL15_2 |
| TC | HRGMv2_0159_10 | HRGMv2_0159_10_71 | 90019 | 91722 | - | 8.A.46.1.3 |
| TC | HRGMv2_0159_10 | HRGMv2_0159_10_72 | 91745 | 94924 | - | 1.B.14.6.1 |
| CAZyme | HRGMv2_0159_10 | HRGMv2_0159_10_73 | 95339 | 96520 | + | GH88 |
| TF | HRGMv2_0159_10 | HRGMv2_0159_10_74 | 96639 | 100736 | + | HTH_AraC |
| CAZyme | HRGMv2_0159_10 | HRGMv2_0159_10_75 | 101012 | 103615 | + | PL15_2 |
| TC | HRGMv2_0159_10 | HRGMv2_0159_10_76 | 103642 | 104379 | + | 9.B.171.1.2 |
| pfam | HRGMv2_0159_10 | HRGMv2_0159_10_77 | 104417 | 105427 | + | DUF6562 |
| NULL(UNKNOWN) | HRGMv2_0159_10 | HRGMv2_0159_10_78 | 105476 | 107026 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0159_10 | HRGMv2_0159_10_79 | 107159 | 109705 | + | PL15 |
| TC | HRGMv2_0159_10 | HRGMv2_0159_10_80 | 109746 | 112961 | + | 1.B.14.6.1 |
| TC | HRGMv2_0159_10 | HRGMv2_0159_10_81 | 112983 | 114677 | + | 8.A.46.1.3 |
Gene ID: HRGMv2_0159_10_55
Type: CAZyme
Location: 59874 - 61073 (+)
Type: CAZyme
Location: 59874 - 61073 (+)
Gene ID: HRGMv2_0159_10_56
Type: CAZyme
Location: 61131 - 63734 (+)
Type: CAZyme
Location: 61131 - 63734 (+)
Gene ID: HRGMv2_0159_10_57
Type:
Location: 63754 - 64635 (+)
Type:
Location: 63754 - 64635 (+)
Gene ID: HRGMv2_0159_10_58
Type: CAZyme
Location: 64671 - 66080 (+)
Type: CAZyme
Location: 64671 - 66080 (+)
Gene ID: HRGMv2_0159_10_59
Type: sulfatase
Location: 66099 - 67499 (+)
Type: sulfatase
Location: 66099 - 67499 (+)
Gene ID: HRGMv2_0159_10_60
Type: CAZyme
Location: 67544 - 70306 (+)
Type: CAZyme
Location: 67544 - 70306 (+)
Gene ID: HRGMv2_0159_10_61
Type: TF
Location: 70334 - 74305 (-)
Type: TF
Location: 70334 - 74305 (-)
Gene ID: HRGMv2_0159_10_62
Type: CAZyme
Location: 74583 - 75788 (-)
Type: CAZyme
Location: 74583 - 75788 (-)
Gene ID: HRGMv2_0159_10_63
Type: CAZyme
Location: 75829 - 78831 (-)
Type: CAZyme
Location: 75829 - 78831 (-)
Gene ID: HRGMv2_0159_10_64
Type: pfam
Location: 79444 - 80277 (-)
Type: pfam
Location: 79444 - 80277 (-)
Gene ID: HRGMv2_0159_10_65
Type: pfam
Location: 80290 - 81126 (-)
Type: pfam
Location: 80290 - 81126 (-)
Gene ID: HRGMv2_0159_10_66
Type: CAZyme
Location: 81160 - 83700 (-)
Type: CAZyme
Location: 81160 - 83700 (-)
Gene ID: HRGMv2_0159_10_67
Type: pfam
Location: 83817 - 85490 (-)
Type: pfam
Location: 83817 - 85490 (-)
Gene ID: HRGMv2_0159_10_68
Type: pfam
Location: 85521 - 86570 (-)
Type: pfam
Location: 85521 - 86570 (-)
Gene ID: HRGMv2_0159_10_69
Type: TC
Location: 86583 - 87386 (-)
Type: TC
Location: 86583 - 87386 (-)
Gene ID: HRGMv2_0159_10_70
Type: CAZyme
Location: 87404 - 90010 (-)
Type: CAZyme
Location: 87404 - 90010 (-)
Gene ID: HRGMv2_0159_10_71
Type: TC
Location: 90019 - 91722 (-)
Type: TC
Location: 90019 - 91722 (-)
Gene ID: HRGMv2_0159_10_72
Type: TC
Location: 91745 - 94924 (-)
Type: TC
Location: 91745 - 94924 (-)
Gene ID: HRGMv2_0159_10_73
Type: CAZyme
Location: 95339 - 96520 (+)
Type: CAZyme
Location: 95339 - 96520 (+)
Gene ID: HRGMv2_0159_10_74
Type: TF
Location: 96639 - 100736 (+)
Type: TF
Location: 96639 - 100736 (+)
Gene ID: HRGMv2_0159_10_75
Type: CAZyme
Location: 101012 - 103615 (+)
Type: CAZyme
Location: 101012 - 103615 (+)
Gene ID: HRGMv2_0159_10_76
Type: TC
Location: 103642 - 104379 (+)
Type: TC
Location: 103642 - 104379 (+)
Gene ID: HRGMv2_0159_10_77
Type: pfam
Location: 104417 - 105427 (+)
Type: pfam
Location: 104417 - 105427 (+)
Gene ID: HRGMv2_0159_10_78
Type:
Location: 105476 - 107026 (+)
Type:
Location: 105476 - 107026 (+)
Gene ID: HRGMv2_0159_10_79
Type: CAZyme
Location: 107159 - 109705 (+)
Type: CAZyme
Location: 107159 - 109705 (+)
Gene ID: HRGMv2_0159_10_80
Type: TC
Location: 109746 - 112961 (+)
Type: TC
Location: 109746 - 112961 (+)
Gene ID: HRGMv2_0159_10_81
Type: TC
Location: 112983 - 114677 (+)
Type: TC
Location: 112983 - 114677 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0159_10_78 | vegetarian > omnivore | 1.14968 | 0.00744 |