Genome Details
Selected Rep_genome_ID: GH021_63
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900772715
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| BF359_bin.24 | 1,738,468 | 90.05% | 0% | NA | Africa | H3AfricaPhase2 |
| GH021_63 | 2,760,863 | 97.96% | 0% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_3086 | 2,465,724 | 93.38% | 0% | Malaysia | Asia | HRGM |
| MGYG000000573 | 2,095,140 | 92.54% | 0% | Madagascar | Africa | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_A_21_1706.216 | 2,241,716 | 95.24% | 0% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| GH021_63_CGC22 | CGCFAM_00008 | Yes | 5 | 2 | |
| GH021_63_CGC43 | CGCFAM_00010 | Yes | 7 | 1 | alpha-glucan |
| GH021_63_CGC11 | CGCFAM_00021 | Yes | 3 | 1 | |
| GH021_63_CGC8 | CGCFAM_00032 | Yes | 4 | 1 | |
| GH021_63_CGC41 | CGCFAM_00047 | Yes | 7 | 3 | |
| GH021_63_CGC32 | CGCFAM_00054 | Yes | 4 | 1 | |
| GH021_63_CGC37 | CGCFAM_00057 | Yes | 4 | 1 | |
| GH021_63_CGC20 | CGCFAM_00073 | Yes | 3 | 2 | |
| GH021_63_CGC42 | CGCFAM_00078 | Yes | 4 | 2 | galactan |
| GH021_63_CGC33 | CGCFAM_00093 | Yes | 4 | 2 | |
| GH021_63_CGC35 | CGCFAM_00233 | Yes | 4 | 1 | |
| GH021_63_CGC34 | CGCFAM_00410 | Yes | 6 | 5 | |
| GH021_63_CGC18 | CGCFAM_00451 | Yes | 11 | 8 | |
| GH021_63_CGC1 | CGCFAM_00458 | Yes | 8 | 3 | |
| GH021_63_CGC38 | CGCFAM_00470 | Yes | 3 | 1 | |
| GH021_63_CGC24 | CGCFAM_01647 | Yes | 4 | 2 | |
| GH021_63_CGC19 | CGCFAM_01859 | Yes | 6 | 1 | |
| GH021_63_CGC16 | CGCFAM_02422 | Yes | 8 | 3 | |
| GH021_63_CGC25 | CGCFAM_05127 | Yes | 6 | 1 | |
| GH021_63_CGC40 | CGCFAM_06769 | Yes | 4 | 1 | |
| GH021_63_CGC2 | CGCFAM_08189 | Yes | 8 | 3 | |
| GH021_63_CGC27 | CGCFAM_09333 | Yes | 6 | 1 |
Top CAZyme Families